Difference between revisions of "RXN-17024"

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(Created page with "Category:Gene == Gene Tiso_gene_15823 == * left end position: ** 694 * transcription direction: ** POSITIVE * right end position: ** 1317 * centisome position: ** 14.52794...")
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-5723 PWY-5723] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-58024 TAX-5...")
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[[Category:Gene]]
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[[Category:Pathway]]
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== Gene Tiso_gene_15823 ==
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-5723 PWY-5723] ==
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* left end position:
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* taxonomic range:
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** 694
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-58024 TAX-58024]
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* transcription direction:
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* common name:
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** POSITIVE
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** Rubisco shunt
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* right end position:
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−
** 1317
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−
* centisome position:
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** 14.527946   
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* Synonym(s):
 
* Synonym(s):
  
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== Reactions associated ==
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== Reaction(s) found ==
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* [[XYLULOKIN-RXN]]
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'''10''' reactions found over '''10''' reactions in the full pathway
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** in-silico_annotation
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* [[1TRANSKETO-RXN]]
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***automated-name-match
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** 2 associated gene(s):
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** [[pantograph]]-[[athaliana]]
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*** [[Tiso_gene_5008]]
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** [[pantograph]]-[[esiliculosus]]
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*** [[Tiso_gene_11559]]
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== Pathways associated ==
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** 5 reconstruction source(s) associated:
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* [[LARABITOLUTIL-PWY]]
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*** [[annotation-experimental_annotation]]
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* [[DARABITOLUTIL-PWY]]
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*** [[orthology-athaliana]]
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* [[XYLCAT-PWY]]
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*** [[annotation-in-silico_annotation]]
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*** [[orthology-synechocystis]]
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*** [[manual-primary_network]]
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* [[2PGADEHYDRAT-RXN]]
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** 4 associated gene(s):
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*** [[Tiso_gene_14718]]
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*** [[Tiso_gene_8720]]
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*** [[Tiso_gene_5619]]
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*** [[Tiso_gene_13317]]
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** 7 reconstruction source(s) associated:
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*** [[annotation-experimental_annotation]]
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*** [[orthology-esiliculosus]]
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*** [[annotation-in-silico_annotation]]
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*** [[orthology-athaliana]]
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*** [[orthology-synechocystis]]
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*** [[manual-primary_network]]
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*** [[orthology-creinhardtii]]
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* [[2TRANSKETO-RXN]]
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** 2 associated gene(s):
 +
*** [[Tiso_gene_11559]]
 +
*** [[Tiso_gene_5008]]
 +
** 5 reconstruction source(s) associated:
 +
*** [[annotation-experimental_annotation]]
 +
*** [[orthology-athaliana]]
 +
*** [[orthology-creinhardtii]]
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*** [[manual-primary_network]]
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*** [[annotation-in-silico_annotation]]
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* [[3PGAREARR-RXN]]
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** 16 associated gene(s):
 +
*** [[Tiso_gene_2667]]
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*** [[Tiso_gene_9922]]
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*** [[Tiso_gene_15048]]
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*** [[Tiso_gene_2841]]
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*** [[Tiso_gene_14530]]
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*** [[Tiso_gene_16754]]
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*** [[Tiso_gene_2365]]
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*** [[Tiso_gene_16271]]
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*** [[Tiso_gene_5468]]
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*** [[Tiso_gene_20311]]
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*** [[Tiso_gene_14664]]
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*** [[Tiso_gene_15391]]
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*** [[Tiso_gene_14212]]
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*** [[Tiso_gene_10516]]
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*** [[Tiso_gene_9923]]
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*** [[Tiso_gene_7201]]
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** 7 reconstruction source(s) associated:
 +
*** [[annotation-experimental_annotation]]
 +
*** [[orthology-esiliculosus]]
 +
*** [[annotation-in-silico_annotation]]
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*** [[orthology-athaliana]]
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*** [[orthology-synechocystis]]
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*** [[manual-primary_network]]
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*** [[orthology-creinhardtii]]
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* [[PEPDEPHOS-RXN]]
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** 4 associated gene(s):
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*** [[Tiso_gene_14504]]
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*** [[Tiso_gene_18206]]
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*** [[Tiso_gene_974]]
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*** [[Tiso_gene_14505]]
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** 7 reconstruction source(s) associated:
 +
*** [[annotation-experimental_annotation]]
 +
*** [[orthology-esiliculosus]]
 +
*** [[annotation-in-silico_annotation]]
 +
*** [[orthology-athaliana]]
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*** [[orthology-synechocystis]]
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*** [[manual-primary_network]]
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*** [[orthology-creinhardtii]]
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* [[PHOSPHORIBULOKINASE-RXN]]
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** 1 associated gene(s):
 +
*** [[Tiso_gene_17637]]
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** 7 reconstruction source(s) associated:
 +
*** [[annotation-experimental_annotation]]
 +
*** [[orthology-esiliculosus]]
 +
*** [[annotation-in-silico_annotation]]
 +
*** [[orthology-athaliana]]
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*** [[orthology-synechocystis]]
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*** [[manual-primary_network]]
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*** [[orthology-creinhardtii]]
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* [[RIB5PISOM-RXN]]
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** 1 associated gene(s):
 +
*** [[Tiso_gene_18217]]
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** 5 reconstruction source(s) associated:
 +
*** [[orthology-athaliana]]
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*** [[annotation-in-silico_annotation]]
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*** [[orthology-synechocystis]]
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*** [[orthology-esiliculosus]]
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*** [[manual-primary_network]]
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* [[RIBULOSE-BISPHOSPHATE-CARBOXYLASE-RXN]]
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** 1 associated gene(s):
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*** [[Tiso_gene_12199]]
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** 2 reconstruction source(s) associated:
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*** [[manual-primary_network]]
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*** [[orthology-esiliculosus]]
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* [[RIBULP3EPIM-RXN]]
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** 3 associated gene(s):
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*** [[Tiso_gene_4754]]
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*** [[Tiso_gene_19140]]
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*** [[Tiso_gene_10879]]
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** 7 reconstruction source(s) associated:
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*** [[annotation-experimental_annotation]]
 +
*** [[orthology-esiliculosus]]
 +
*** [[annotation-in-silico_annotation]]
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*** [[orthology-athaliana]]
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*** [[orthology-synechocystis]]
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*** [[manual-primary_network]]
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*** [[orthology-creinhardtii]]
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* [[TRANSALDOL-RXN]]
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** 2 associated gene(s):
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*** [[Tiso_gene_17601]]
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*** [[Tiso_gene_1831]]
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** 6 reconstruction source(s) associated:
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*** [[annotation-experimental_annotation]]
 +
*** [[orthology-esiliculosus]]
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*** [[annotation-in-silico_annotation]]
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*** [[orthology-athaliana]]
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*** [[manual-primary_network]]
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*** [[orthology-creinhardtii]]
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== Reaction(s) not found ==
 
== External links  ==
 
== External links  ==
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{{#set: left end position=694}}
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{{#set: taxonomic range=TAX-58024}}
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{{#set: transcription direction=POSITIVE}}
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{{#set: common name=Rubisco shunt}}
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{{#set: right end position=1317}}
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{{#set: reaction found=10}}
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{{#set: centisome position=14.527946    }}
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{{#set: total reaction=10}}
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{{#set: reaction associated=XYLULOKIN-RXN}}
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{{#set: completion rate=100.0}}
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{{#set: pathway associated=LARABITOLUTIL-PWY|DARABITOLUTIL-PWY|XYLCAT-PWY}}
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Revision as of 19:03, 18 March 2018

Pathway PWY-5723

  • taxonomic range:
  • common name:
    • Rubisco shunt
  • Synonym(s):

Reaction(s) found

10 reactions found over 10 reactions in the full pathway

Reaction(s) not found

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=RXN-17024&oldid=21506"