Difference between revisions of "RXN-17024"

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(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-5723 PWY-5723] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-58024 TAX-5...")
(Created page with "Category:Gene == Gene Tiso_gene_4330 == * right end position: ** 14679 * transcription direction: ** NEGATIVE * left end position: ** 7246 * centisome position: ** 48.2198...")
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[[Category:Pathway]]
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[[Category:Gene]]
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-5723 PWY-5723] ==
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== Gene Tiso_gene_4330 ==
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* taxonomic range:
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* right end position:
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-58024 TAX-58024]
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** 14679
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* common name:
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* transcription direction:
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** Rubisco shunt
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** NEGATIVE
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* left end position:
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** 7246
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* centisome position:
 +
** 48.21987   
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction(s) found ==
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== Reactions associated ==
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'''10''' reactions found over '''10''' reactions in the full pathway
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* Reaction: [[ATPASE-RXN]]
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* [[1TRANSKETO-RXN]]
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** Source: [[annotation-in-silico_annotation]]
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** 2 associated gene(s):
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*** Assignment: ec-number
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*** [[Tiso_gene_5008]]
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* Reaction: [[NUCLEOSIDE-TRIPHOSPHATASE-RXN]]
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*** [[Tiso_gene_11559]]
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** Source: [[annotation-in-silico_annotation]]
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** 5 reconstruction source(s) associated:
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*** Assignment: ec-number
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*** [[annotation-experimental_annotation]]
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* Reaction: [[RXN-12195]]
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*** [[orthology-athaliana]]
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** Source: [[annotation-in-silico_annotation]]
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*** [[annotation-in-silico_annotation]]
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*** Assignment: ec-number
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*** [[orthology-synechocystis]]
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* Reaction: [[RXN-12196]]
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*** [[manual-primary_network]]
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** Source: [[annotation-in-silico_annotation]]
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* [[2PGADEHYDRAT-RXN]]
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*** Assignment: ec-number
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** 4 associated gene(s):
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* Reaction: [[RXN0-5462]]
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*** [[Tiso_gene_14718]]
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** Source: [[annotation-in-silico_annotation]]
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*** [[Tiso_gene_8720]]
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*** Assignment: ec-number
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*** [[Tiso_gene_5619]]
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== Pathways associated ==
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*** [[Tiso_gene_13317]]
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* [[PWY-7184]]
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** 7 reconstruction source(s) associated:
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* [[PWY-7198]]
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*** [[annotation-experimental_annotation]]
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* [[PWY-6545]]
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*** [[orthology-esiliculosus]]
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* [[PWY-7210]]
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*** [[annotation-in-silico_annotation]]
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−
*** [[orthology-athaliana]]
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−
*** [[orthology-synechocystis]]
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−
*** [[manual-primary_network]]
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*** [[orthology-creinhardtii]]
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* [[2TRANSKETO-RXN]]
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−
** 2 associated gene(s):
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−
*** [[Tiso_gene_11559]]
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−
*** [[Tiso_gene_5008]]
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−
** 5 reconstruction source(s) associated:
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−
*** [[annotation-experimental_annotation]]
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−
*** [[orthology-athaliana]]
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−
*** [[orthology-creinhardtii]]
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−
*** [[manual-primary_network]]
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−
*** [[annotation-in-silico_annotation]]
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−
* [[3PGAREARR-RXN]]
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−
** 16 associated gene(s):
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−
*** [[Tiso_gene_2667]]
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−
*** [[Tiso_gene_9922]]
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−
*** [[Tiso_gene_15048]]
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−
*** [[Tiso_gene_2841]]
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−
*** [[Tiso_gene_14530]]
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−
*** [[Tiso_gene_16754]]
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−
*** [[Tiso_gene_2365]]
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−
*** [[Tiso_gene_16271]]
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−
*** [[Tiso_gene_5468]]
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−
*** [[Tiso_gene_20311]]
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−
*** [[Tiso_gene_14664]]
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−
*** [[Tiso_gene_15391]]
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−
*** [[Tiso_gene_14212]]
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−
*** [[Tiso_gene_10516]]
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−
*** [[Tiso_gene_9923]]
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−
*** [[Tiso_gene_7201]]
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−
** 7 reconstruction source(s) associated:
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−
*** [[annotation-experimental_annotation]]
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−
*** [[orthology-esiliculosus]]
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−
*** [[annotation-in-silico_annotation]]
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−
*** [[orthology-athaliana]]
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−
*** [[orthology-synechocystis]]
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−
*** [[manual-primary_network]]
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−
*** [[orthology-creinhardtii]]
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−
* [[PEPDEPHOS-RXN]]
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−
** 4 associated gene(s):
+
−
*** [[Tiso_gene_14504]]
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−
*** [[Tiso_gene_18206]]
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−
*** [[Tiso_gene_974]]
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−
*** [[Tiso_gene_14505]]
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−
** 7 reconstruction source(s) associated:
+
−
*** [[annotation-experimental_annotation]]
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−
*** [[orthology-esiliculosus]]
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−
*** [[annotation-in-silico_annotation]]
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−
*** [[orthology-athaliana]]
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−
*** [[orthology-synechocystis]]
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−
*** [[manual-primary_network]]
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−
*** [[orthology-creinhardtii]]
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−
* [[PHOSPHORIBULOKINASE-RXN]]
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−
** 1 associated gene(s):
+
−
*** [[Tiso_gene_17637]]
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−
** 7 reconstruction source(s) associated:
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−
*** [[annotation-experimental_annotation]]
+
−
*** [[orthology-esiliculosus]]
+
−
*** [[annotation-in-silico_annotation]]
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−
*** [[orthology-athaliana]]
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−
*** [[orthology-synechocystis]]
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−
*** [[manual-primary_network]]
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−
*** [[orthology-creinhardtii]]
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−
* [[RIB5PISOM-RXN]]
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−
** 1 associated gene(s):
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−
*** [[Tiso_gene_18217]]
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−
** 5 reconstruction source(s) associated:
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−
*** [[orthology-athaliana]]
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−
*** [[annotation-in-silico_annotation]]
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*** [[orthology-synechocystis]]
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*** [[orthology-esiliculosus]]
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*** [[manual-primary_network]]
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−
* [[RIBULOSE-BISPHOSPHATE-CARBOXYLASE-RXN]]
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−
** 1 associated gene(s):
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*** [[Tiso_gene_12199]]
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−
** 2 reconstruction source(s) associated:
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−
*** [[manual-primary_network]]
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−
*** [[orthology-esiliculosus]]
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* [[RIBULP3EPIM-RXN]]
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−
** 3 associated gene(s):
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−
*** [[Tiso_gene_4754]]
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−
*** [[Tiso_gene_19140]]
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−
*** [[Tiso_gene_10879]]
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−
** 7 reconstruction source(s) associated:
+
−
*** [[annotation-experimental_annotation]]
+
−
*** [[orthology-esiliculosus]]
+
−
*** [[annotation-in-silico_annotation]]
+
−
*** [[orthology-athaliana]]
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−
*** [[orthology-synechocystis]]
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−
*** [[manual-primary_network]]
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−
*** [[orthology-creinhardtii]]
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−
* [[TRANSALDOL-RXN]]
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−
** 2 associated gene(s):
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−
*** [[Tiso_gene_17601]]
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−
*** [[Tiso_gene_1831]]
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−
** 6 reconstruction source(s) associated:
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−
*** [[annotation-experimental_annotation]]
+
−
*** [[orthology-esiliculosus]]
+
−
*** [[annotation-in-silico_annotation]]
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*** [[orthology-athaliana]]
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*** [[manual-primary_network]]
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−
*** [[orthology-creinhardtii]]
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−
== Reaction(s) not found ==
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== External links  ==
 
== External links  ==
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{{#set: taxonomic range=TAX-58024}}
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{{#set: right end position=14679}}
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{{#set: common name=Rubisco shunt}}
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{{#set: transcription direction=NEGATIVE}}
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{{#set: reaction found=10}}
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{{#set: left end position=7246}}
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{{#set: total reaction=10}}
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{{#set: centisome position=48.21987    }}
−
{{#set: completion rate=100.0}}
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{{#set: reaction associated=ATPASE-RXN|NUCLEOSIDE-TRIPHOSPHATASE-RXN|RXN-12195|RXN-12196|RXN0-5462}}
 +
{{#set: pathway associated=PWY-7184|PWY-7198|PWY-6545|PWY-7210}}

Revision as of 15:53, 21 March 2018

Gene Tiso_gene_4330

  • right end position:
    • 14679
  • transcription direction:
    • NEGATIVE
  • left end position:
    • 7246
  • centisome position:
    • 48.21987
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=RXN-17024&oldid=31043"