Difference between revisions of "RXN-17116"

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(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-358 CPD-358] == * smiles: ** CC([CH]=O)O * inchi key: ** InChIKey=BSABBBMNWQWLLU-GSVOUGTGSA...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-17116 RXN-17116] == * direction: ** LEFT-TO-RIGHT * common name: ** thiolase ** acetyl-_c-acety...")
 
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[[Category:Metabolite]]
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[[Category:Reaction]]
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-358 CPD-358] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-17116 RXN-17116] ==
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* smiles:
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* direction:
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** CC([CH]=O)O
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** LEFT-TO-RIGHT
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* inchi key:
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** InChIKey=BSABBBMNWQWLLU-GSVOUGTGSA-N
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* common name:
 
* common name:
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** (R)-lactaldehyde
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** thiolase
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* molecular weight:
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** acetyl-_c-acetyltransferase
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** 74.079   
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** 3-ketoacyl-_thiolase
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* ec number:
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** [http://enzyme.expasy.org/EC/2.3.1.16 EC-2.3.1.16]
 
* Synonym(s):
 
* Synonym(s):
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** D-lactaldehyde
 
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** D-2-hydroxy-propionaldehyde
 
  
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== Reaction(s) known to consume the compound ==
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== Reaction Formula ==
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== Reaction(s) known to produce the compound ==
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* With identifiers:
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== Reaction(s) of unknown directionality ==
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** 1 [[CPD-18494]][c] '''+''' 1 [[CO-A]][c] '''=>''' 1 [[CPD-17365]][c] '''+''' 1 [[ACETYL-COA]][c]
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* [[D-LACTALDEHYDE-DEHYDROGENASE-RXN]]
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* With common name(s):
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** 1 3-oxo-(6Z,9Z,12Z,15Z,18Z)-tetracosapentaenoyl-CoA[c] '''+''' 1 coenzyme A[c] '''=>''' 1 (4Z,7Z,10Z,13Z,16Z)-docosapentaenoyl-CoA[c] '''+''' 1 acetyl-CoA[c]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* Gene: [[Tiso_gene_3856]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: EC-NUMBER
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* Gene: [[Tiso_gene_17451]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: EC-NUMBER
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** Source: [[annotation-experimental_annotation]]
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*** Assignment: EC-NUMBER
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* Gene: [[Tiso_gene_15327]]
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** Source: [[annotation-experimental_annotation]]
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*** Assignment: EC-NUMBER
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* Gene: [[Tiso_gene_10116]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: EC-NUMBER
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** Source: [[annotation-experimental_annotation]]
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*** Assignment: EC-NUMBER
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* Gene: [[Tiso_gene_3855]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: EC-NUMBER
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** Source: [[annotation-experimental_annotation]]
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*** Assignment: EC-NUMBER
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== Pathways  ==
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* [[PWY-7726]], (4Z,7Z,10Z,13Z,16Z)-docosa-4,7,10,13,16-pentaenoate biosynthesis (6-desaturase): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7726 PWY-7726]
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** '''5''' reactions found over '''13''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[annotation]]
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** Source: [[annotation-experimental_annotation]]
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*** Tool: [[pathwaytools]]
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** Source: [[annotation-in-silico_annotation]]
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*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
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* METABOLIGHTS : MTBLC17167
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{{#set: direction=LEFT-TO-RIGHT}}
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* PUBCHEM:
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{{#set: common name=thiolase}}
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** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=439350 439350]
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{{#set: common name=acetyl-_c-acetyltransferase}}
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* HMDB : HMDB06458
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{{#set: common name=3-ketoacyl-_thiolase}}
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* LIGAND-CPD:
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{{#set: ec number=EC-2.3.1.16}}
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** [http://www.genome.jp/dbget-bin/www_bget?C00937 C00937]
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{{#set: gene associated=Tiso_gene_3856|Tiso_gene_17451|Tiso_gene_15327|Tiso_gene_10116|Tiso_gene_3855}}
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* CHEMSPIDER:
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{{#set: in pathway=PWY-7726}}
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** [http://www.chemspider.com/Chemical-Structure.388473.html 388473]
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{{#set: reconstruction category=annotation}}
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* CHEBI:
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{{#set: reconstruction source=annotation-experimental_annotation|annotation-in-silico_annotation}}
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** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=17167 17167]
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{{#set: reconstruction tool=pathwaytools}}
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* BIGG : lald__D
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{{#set: smiles=CC([CH]=O)O}}
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{{#set: inchi key=InChIKey=BSABBBMNWQWLLU-GSVOUGTGSA-N}}
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{{#set: common name=(R)-lactaldehyde}}
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{{#set: molecular weight=74.079    }}
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{{#set: common name=D-lactaldehyde|D-2-hydroxy-propionaldehyde}}
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{{#set: consumed or produced by=D-LACTALDEHYDE-DEHYDROGENASE-RXN}}
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Latest revision as of 20:15, 21 March 2018

Reaction RXN-17116

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • thiolase
    • acetyl-_c-acetyltransferase
    • 3-ketoacyl-_thiolase
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 3-oxo-(6Z,9Z,12Z,15Z,18Z)-tetracosapentaenoyl-CoA[c] + 1 coenzyme A[c] => 1 (4Z,7Z,10Z,13Z,16Z)-docosapentaenoyl-CoA[c] + 1 acetyl-CoA[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-7726, (4Z,7Z,10Z,13Z,16Z)-docosa-4,7,10,13,16-pentaenoate biosynthesis (6-desaturase): PWY-7726
    • 5 reactions found over 13 reactions in the full pathway

Reconstruction information

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=RXN-17116&oldid=40457"