Difference between revisions of "RXN-17472"
From metabolic_network
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=PEPTIDYLGLYCINE-MONOOXYGENASE-RXN PEPTIDYLGLYCINE-MONOOXYGENASE-RXN] == * direction: ** LEFT-TO-RIG...") |
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-17472 RXN-17472] == * direction: ** LEFT-TO-RIGHT * common name: ** biotin_synthase * Synonym(s...") |
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[[Category:Reaction]] | [[Category:Reaction]] | ||
| − | == Reaction [http://metacyc.org/META/NEW-IMAGE?object= | + | == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-17472 RXN-17472] == |
* direction: | * direction: | ||
** LEFT-TO-RIGHT | ** LEFT-TO-RIGHT | ||
* common name: | * common name: | ||
| − | ** | + | ** biotin_synthase |
| − | + | ||
| − | + | ||
* Synonym(s): | * Synonym(s): | ||
== Reaction Formula == | == Reaction Formula == | ||
* With identifiers: | * With identifiers: | ||
| − | ** 1 [[ | + | ** 1 [[PROTON]][c] '''+''' 1 [[DETHIOBIOTIN]][c] '''+''' 2 [[Reduced-2Fe-2S-Ferredoxins]][c] '''+''' 1 [[S-ADENOSYLMETHIONINE]][c] '''+''' 1 [[Sulfurated-Sulfur-Acceptors]][c] '''=>''' 1 [[MET]][c] '''+''' 1 [[CPD-5662]][c] '''+''' 2 [[Oxidized-2Fe-2S-Ferredoxins]][c] '''+''' 1 [[Unsulfurated-Sulfur-Acceptors]][c] '''+''' 1 [[CH33ADO]][c] |
* With common name(s): | * With common name(s): | ||
| − | ** 1 | + | ** 1 H+[c] '''+''' 1 dethiobiotin[c] '''+''' 2 a reduced [2Fe-2S] ferredoxin[c] '''+''' 1 S-adenosyl-L-methionine[c] '''+''' 1 a sulfurated [sulfur carrier][c] '''=>''' 1 L-methionine[c] '''+''' 1 9-mercaptodethiobiotin[c] '''+''' 2 an oxidized [2Fe-2S] ferredoxin[c] '''+''' 1 an unsulfurated [sulfur carrier][c] '''+''' 1 5'-deoxyadenosine[c] |
== Genes associated with this reaction == | == Genes associated with this reaction == | ||
Genes have been associated with this reaction based on different elements listed below. | Genes have been associated with this reaction based on different elements listed below. | ||
| − | * Gene: [[ | + | * Gene: [[Tiso_gene_10345]] |
** Source: [[annotation-in-silico_annotation]] | ** Source: [[annotation-in-silico_annotation]] | ||
| − | *** Assignment: | + | *** Assignment: AUTOMATED-NAME-MATCH |
| + | ** Source: [[annotation-experimental_annotation]] | ||
| + | *** Assignment: AUTOMATED-NAME-MATCH | ||
== Pathways == | == Pathways == | ||
== Reconstruction information == | == Reconstruction information == | ||
* Category: [[annotation]] | * Category: [[annotation]] | ||
| + | ** Source: [[annotation-experimental_annotation]] | ||
| + | *** Tool: [[pathwaytools]] | ||
** Source: [[annotation-in-silico_annotation]] | ** Source: [[annotation-in-silico_annotation]] | ||
*** Tool: [[pathwaytools]] | *** Tool: [[pathwaytools]] | ||
== External links == | == External links == | ||
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{{#set: direction=LEFT-TO-RIGHT}} | {{#set: direction=LEFT-TO-RIGHT}} | ||
| − | {{#set: common name= | + | {{#set: common name=biotin_synthase}} |
| − | + | {{#set: gene associated=Tiso_gene_10345}} | |
| − | {{#set: gene associated= | + | |
{{#set: in pathway=}} | {{#set: in pathway=}} | ||
{{#set: reconstruction category=annotation}} | {{#set: reconstruction category=annotation}} | ||
| − | {{#set: reconstruction source=annotation-in-silico_annotation}} | + | {{#set: reconstruction source=annotation-experimental_annotation|annotation-in-silico_annotation}} |
{{#set: reconstruction tool=pathwaytools}} | {{#set: reconstruction tool=pathwaytools}} | ||
Latest revision as of 21:24, 21 March 2018
Contents
Reaction RXN-17472
- direction:
- LEFT-TO-RIGHT
- common name:
- biotin_synthase
- Synonym(s):
Reaction Formula
- With identifiers:
- 1 PROTON[c] + 1 DETHIOBIOTIN[c] + 2 Reduced-2Fe-2S-Ferredoxins[c] + 1 S-ADENOSYLMETHIONINE[c] + 1 Sulfurated-Sulfur-Acceptors[c] => 1 MET[c] + 1 CPD-5662[c] + 2 Oxidized-2Fe-2S-Ferredoxins[c] + 1 Unsulfurated-Sulfur-Acceptors[c] + 1 CH33ADO[c]
- With common name(s):
- 1 H+[c] + 1 dethiobiotin[c] + 2 a reduced [2Fe-2S] ferredoxin[c] + 1 S-adenosyl-L-methionine[c] + 1 a sulfurated [sulfur carrier][c] => 1 L-methionine[c] + 1 9-mercaptodethiobiotin[c] + 2 an oxidized [2Fe-2S] ferredoxin[c] + 1 an unsulfurated [sulfur carrier][c] + 1 5'-deoxyadenosine[c]
Genes associated with this reaction
Genes have been associated with this reaction based on different elements listed below.
- Gene: Tiso_gene_10345
- Source: annotation-in-silico_annotation
- Assignment: AUTOMATED-NAME-MATCH
- Source: annotation-experimental_annotation
- Assignment: AUTOMATED-NAME-MATCH
- Source: annotation-in-silico_annotation
Pathways
Reconstruction information
- Category: annotation
- Source: annotation-experimental_annotation
- Tool: pathwaytools
- Source: annotation-in-silico_annotation
- Tool: pathwaytools
- Source: annotation-experimental_annotation
