Difference between revisions of "RXN-17782"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=SHIKIMATE-5-DEHYDROGENASE-RXN SHIKIMATE-5-DEHYDROGENASE-RXN] == * direction: ** LEFT-TO-RIGHT * com...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=2-HALOACID-DEHALOGENASE-RXN 2-HALOACID-DEHALOGENASE-RXN] == * direction: ** LEFT-TO-RIGHT * common...")
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=SHIKIMATE-5-DEHYDROGENASE-RXN SHIKIMATE-5-DEHYDROGENASE-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=2-HALOACID-DEHALOGENASE-RXN 2-HALOACID-DEHALOGENASE-RXN] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** pentafunctional_protein
+
** had_family_hydrolase
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/1.1.1.25 EC-1.1.1.25]
+
** [http://enzyme.expasy.org/EC/3.8.1.10 EC-3.8.1.10]
 +
** [http://enzyme.expasy.org/EC/3.8.1.2 EC-3.8.1.2]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[3-DEHYDRO-SHIKIMATE]][c] '''+''' 1 [[NADPH]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[SHIKIMATE]][c] '''+''' 1 [[NADP]][c]
+
** 1 [[S-2-Haloacids]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[R-2-Hydroxyacids]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[Halide-Anions]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 3-dehydroshikimate[c] '''+''' 1 NADPH[c] '''+''' 1 H+[c] '''=>''' 1 shikimate[c] '''+''' 1 NADP+[c]
+
** 1 an (S)-2-haloacid[c] '''+''' 1 H2O[c] '''=>''' 1 an (R)-2-hydroxyacid[c] '''+''' 1 H+[c] '''+''' 1 a halide anion[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Tiso_gene_5753]]
+
* [[Tiso_gene_3200]]
 
** IN-SILICO_ANNOTATION
 
** IN-SILICO_ANNOTATION
−
***EC-NUMBER
+
***AUTOMATED-NAME-MATCH
−
** [[pantograph]]-[[esiliculosus]]
+
−
* [[Tiso_gene_5752]]
+
−
** IN-SILICO_ANNOTATION
+
−
***EC-NUMBER
+
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY-6163]], chorismate biosynthesis from 3-dehydroquinate: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6163 PWY-6163]
 
−
** '''6''' reactions found over '''6''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[orthology]]:
 
−
** [[pantograph]]:
 
−
*** [[esiliculosus]]
 
−
* [[manual]]:
 
−
** [[primary_network]]
 
 
* [[annotation]]:
 
* [[annotation]]:
 
** [[pathwaytools]]:
 
** [[pathwaytools]]:
 
*** [[in-silico_annotation]]
 
*** [[in-silico_annotation]]
 
== External links  ==
 
== External links  ==
−
* RHEA:
 
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=17737 17737]
 
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R02413 R02413]
+
** [http://www.genome.jp/dbget-bin/www_bget?R03830 R03830]
 
* UNIPROT:
 
* UNIPROT:
−
** [http://www.uniprot.org/uniprot/P07547 P07547]
+
** [http://www.uniprot.org/uniprot/P24069 P24069]
−
** [http://www.uniprot.org/uniprot/P08566 P08566]
+
** [http://www.uniprot.org/uniprot/P24070 P24070]
−
** [http://www.uniprot.org/uniprot/Q58484 Q58484]
+
** [http://www.uniprot.org/uniprot/Q59728 Q59728]
−
** [http://www.uniprot.org/uniprot/Q9PIA0 Q9PIA0]
+
** [http://www.uniprot.org/uniprot/Q59168 Q59168]
−
** [http://www.uniprot.org/uniprot/P0A6D5 P0A6D5]
+
−
** [http://www.uniprot.org/uniprot/Q9CES7 Q9CES7]
+
−
** [http://www.uniprot.org/uniprot/Q44606 Q44606]
+
−
** [http://www.uniprot.org/uniprot/Q44608 Q44608]
+
−
** [http://www.uniprot.org/uniprot/Q44609 Q44609]
+
−
** [http://www.uniprot.org/uniprot/Q44610 Q44610]
+
−
** [http://www.uniprot.org/uniprot/Q44611 Q44611]
+
−
** [http://www.uniprot.org/uniprot/Q44612 Q44612]
+
−
** [http://www.uniprot.org/uniprot/P15770 P15770]
+
−
** [http://www.uniprot.org/uniprot/Q42947 Q42947]
+
−
** [http://www.uniprot.org/uniprot/O65917 O65917]
+
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=pentafunctional_protein}}
+
{{#set: common name=had_family_hydrolase}}
−
{{#set: ec number=EC-1.1.1.25}}
+
{{#set: ec number=EC-3.8.1.10}}
−
{{#set: gene associated=Tiso_gene_5753|Tiso_gene_5752}}
+
{{#set: ec number=EC-3.8.1.2}}
−
{{#set: in pathway=PWY-6163}}
+
{{#set: gene associated=Tiso_gene_3200}}
−
{{#set: reconstruction category=orthology}}
+
{{#set: in pathway=}}
−
{{#set: reconstruction tool=pantograph}}
+
−
{{#set: reconstruction source=esiliculosus}}
+
−
{{#set: reconstruction category=manual}}
+
−
{{#set: reconstruction source=primary_network}}
+
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction source=in-silico_annotation}}
 
{{#set: reconstruction source=in-silico_annotation}}

Revision as of 18:40, 10 January 2018

Reaction 2-HALOACID-DEHALOGENASE-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • had_family_hydrolase
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links





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