Difference between revisions of "RXN-17795"

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(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=OANTIGEN-PWY OANTIGEN-PWY] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-200...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-17795 RXN-17795] == * direction: ** LEFT-TO-RIGHT * common name: ** thiolase ** 3-ketoacyl-_thi...")
 
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[[Category:Pathway]]
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[[Category:Reaction]]
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=OANTIGEN-PWY OANTIGEN-PWY] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-17795 RXN-17795] ==
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* taxonomic range:
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* direction:
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-200918 TAX-200918]
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** LEFT-TO-RIGHT
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-200940 TAX-200940]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-544448 TAX-544448]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-508458 TAX-508458]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-203691 TAX-203691]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-203682 TAX-203682]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-40117 TAX-40117]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-142182 TAX-142182]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-32066 TAX-32066]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-1783270 TAX-1783270]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-74152 TAX-74152]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-68297 TAX-68297]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-1297 TAX-1297]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-200930 TAX-200930]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-1117 TAX-1117]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-200938 TAX-200938]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-200795 TAX-200795]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-1783257 TAX-1783257]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-67814 TAX-67814]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-68336 TAX-68336]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-200783 TAX-200783]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-1224 TAX-1224]
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* common name:
 
* common name:
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** O-antigen building blocks biosynthesis (E. coli)
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** thiolase
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** 3-ketoacyl-_thiolase
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** acetyl-_c-acetyltransferase
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* ec number:
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** [http://enzyme.expasy.org/EC/2.3.1.16 EC-2.3.1.16]
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction(s) found ==
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== Reaction Formula ==
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'''3''' reactions found over '''5''' reactions in the full pathway
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* With identifiers:
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* [[DTDPRHAMSYN-PWY]]
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** 1 [[CPD-19157]][c] '''+''' 1 [[CO-A]][c] '''=>''' 1 [[ACETYL-COA]][c] '''+''' 1 [[CPD-19148]][c]
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** 0 associated gene:
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* With common name(s):
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* [[GALPMUT-RXN]]
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** 1 3-oxo-(7Z)-tetradecenoyl-CoA[c] '''+''' 1 coenzyme A[c] '''=>''' 1 acetyl-CoA[c] '''+''' 1 (5Z)-dodecenoyl-CoA[c]
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** 2 associated gene(s):
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*** [[Tiso_gene_15395]]
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== Genes associated with this reaction  ==
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*** [[Tiso_gene_3775]]
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Genes have been associated with this reaction based on different elements listed below.
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** 2 reconstruction source(s) associated:
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* Gene: [[Tiso_gene_3855]]
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*** [[annotation-in-silico_annotation]]
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** Source: [[annotation-in-silico_annotation]]
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*** [[annotation-experimental_annotation]]
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*** Assignment: EC-NUMBER
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* [[UDPNAGSYN-PWY]]
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** Source: [[annotation-experimental_annotation]]
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** 0 associated gene:
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*** Assignment: EC-NUMBER
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== Reaction(s) not found ==
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* Gene: [[Tiso_gene_15327]]
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** Source: [[annotation-experimental_annotation]]
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*** Assignment: EC-NUMBER
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* Gene: [[Tiso_gene_17451]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: EC-NUMBER
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** Source: [[annotation-experimental_annotation]]
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*** Assignment: EC-NUMBER
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* Gene: [[Tiso_gene_10116]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: EC-NUMBER
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** Source: [[annotation-experimental_annotation]]
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*** Assignment: EC-NUMBER
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* Gene: [[Tiso_gene_3856]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: EC-NUMBER
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== Pathways  ==
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== Reconstruction information  ==
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* Category: [[annotation]]
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** Source: [[annotation-experimental_annotation]]
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*** Tool: [[pathwaytools]]
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** Source: [[annotation-in-silico_annotation]]
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*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
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* ECOCYC:
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{{#set: direction=LEFT-TO-RIGHT}}
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** [http://metacyc.org/ECOLI/NEW-IMAGE?object=OANTIGEN-PWY OANTIGEN-PWY]
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{{#set: common name=thiolase}}
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{{#set: taxonomic range=TAX-200918}}
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{{#set: common name=3-ketoacyl-_thiolase}}
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{{#set: taxonomic range=TAX-200940}}
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{{#set: common name=acetyl-_c-acetyltransferase}}
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{{#set: taxonomic range=TAX-544448}}
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{{#set: ec number=EC-2.3.1.16}}
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{{#set: taxonomic range=TAX-508458}}
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{{#set: gene associated=Tiso_gene_3855|Tiso_gene_15327|Tiso_gene_17451|Tiso_gene_10116|Tiso_gene_3856}}
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{{#set: taxonomic range=TAX-203691}}
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{{#set: in pathway=}}
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{{#set: taxonomic range=TAX-203682}}
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{{#set: reconstruction category=annotation}}
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{{#set: taxonomic range=TAX-40117}}
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{{#set: reconstruction source=annotation-experimental_annotation|annotation-in-silico_annotation}}
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{{#set: taxonomic range=TAX-142182}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: taxonomic range=TAX-32066}}
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{{#set: taxonomic range=TAX-1783270}}
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{{#set: taxonomic range=TAX-74152}}
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{{#set: taxonomic range=TAX-68297}}
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{{#set: taxonomic range=TAX-1297}}
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{{#set: taxonomic range=TAX-200930}}
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{{#set: taxonomic range=TAX-1117}}
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{{#set: taxonomic range=TAX-200938}}
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{{#set: taxonomic range=TAX-200795}}
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{{#set: taxonomic range=TAX-1783257}}
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{{#set: taxonomic range=TAX-67814}}
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{{#set: taxonomic range=TAX-68336}}
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{{#set: taxonomic range=TAX-200783}}
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{{#set: taxonomic range=TAX-1224}}
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{{#set: common name=O-antigen building blocks biosynthesis (E. coli)}}
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{{#set: reaction found=3}}
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{{#set: total reaction=5}}
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{{#set: completion rate=60.0}}
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Latest revision as of 20:39, 21 March 2018

Reaction RXN-17795

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • thiolase
    • 3-ketoacyl-_thiolase
    • acetyl-_c-acetyltransferase
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 3-oxo-(7Z)-tetradecenoyl-CoA[c] + 1 coenzyme A[c] => 1 acetyl-CoA[c] + 1 (5Z)-dodecenoyl-CoA[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=RXN-17795&oldid=42974"