Difference between revisions of "RXN-17858"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=GABATRANSAM-RXN GABATRANSAM-RXN] == * direction: ** REVERSIBLE * ec number: ** [http://enzyme.expas...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-17858 RXN-17858] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/...")
 
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[[Category:Reaction]]
 
[[Category:Reaction]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=GABATRANSAM-RXN GABATRANSAM-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-17858 RXN-17858] ==
 
* direction:
 
* direction:
−
** REVERSIBLE
+
** LEFT-TO-RIGHT
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/2.6.1.19 EC-2.6.1.19]
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** [http://enzyme.expasy.org/EC/2.3.1.bx EC-2.3.1.bx]
 +
** [http://enzyme.expasy.org/EC/2.3.1.bv EC-2.3.1.bv]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[2-KETOGLUTARATE]][c] '''+''' 1 [[4-AMINO-BUTYRATE]][c] '''<=>''' 1 [[SUCC-S-ALD]][c] '''+''' 1 [[GLT]][c]
+
** 1 [[L-methionyl-L-tyrosinyl-Protein]][c] '''+''' 1 [[ACETYL-COA]][c] '''=>''' 1 [[N-Ac-L-methionyl-L-tyrosinyl-Protein]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[CO-A]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 2-oxoglutarate[c] '''+''' 1 4-aminobutanoate[c] '''<=>''' 1 succinate semialdehyde[c] '''+''' 1 L-glutamate[c]
+
** 1 an N-terminal-L-methionyl-L-tyrosyl-[protein][c] '''+''' 1 acetyl-CoA[c] '''=>''' 1 an N-terminal N&alpha;-acetyl-L-methionyl-L-tyrosyl-[protein][c] '''+''' 1 H+[c] '''+''' 1 coenzyme A[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
−
Genes have been associated with this reaction based on different elements listed below.
 
−
* [[Tiso_gene_11231]]
 
−
** [[pantograph]]-[[synechocystis]]
 
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY-4321]], L-glutamate degradation IV: [http://metacyc.org/META/NEW-IMAGE?object=PWY-4321 PWY-4321]
+
* [[PWY-7800]], Ac/N-end rule pathway: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7800 PWY-7800]
−
** '''4''' reactions found over '''5''' reactions in the full pathway
+
** '''21''' reactions found over '''21''' reactions in the full pathway
−
* [[GLUDEG-I-PWY]], GABA shunt: [http://metacyc.org/META/NEW-IMAGE?object=GLUDEG-I-PWY GLUDEG-I-PWY]
+
−
** '''4''' reactions found over '''6''' reactions in the full pathway
+
−
* [[P181-PWY]], nicotine degradation I (pyridine pathway): [http://metacyc.org/META/NEW-IMAGE?object=P181-PWY P181-PWY]
+
−
** '''2''' reactions found over '''17''' reactions in the full pathway
+
−
* [[PWY-5022]], 4-aminobutanoate degradation V: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5022 PWY-5022]
+
−
** '''3''' reactions found over '''7''' reactions in the full pathway
+
−
* [[PWY-6537]], 4-aminobutanoate degradation II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6537 PWY-6537]
+
−
** '''2''' reactions found over '''2''' reactions in the full pathway
+
−
* [[PWY-6536]], 4-aminobutanoate degradation III: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6536 PWY-6536]
+
−
** '''1''' reactions found over '''2''' reactions in the full pathway
+
−
* [[PWY-6535]], 4-aminobutanoate degradation I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6535 PWY-6535]
+
−
** '''2''' reactions found over '''2''' reactions in the full pathway
+
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* Category: [[orthology]]
+
* Category: [[annotation]]
−
** Source: [[orthology-synechocystis]]
+
** Source: [[annotation-in-silico_annotation]]
−
*** Tool: [[pantograph]]
+
*** Tool: [[pathwaytools]]
 +
** Source: [[annotation-experimental_annotation]]
 +
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
−
* RHEA:
+
{{#set: direction=LEFT-TO-RIGHT}}
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=23352 23352]
+
{{#set: ec number=EC-2.3.1.bx}}
−
* LIGAND-RXN:
+
{{#set: ec number=EC-2.3.1.bv}}
−
** [http://www.genome.jp/dbget-bin/www_bget?R01648 R01648]
+
{{#set: in pathway=PWY-7800}}
−
* UNIPROT:
+
{{#set: reconstruction category=annotation}}
−
** [http://www.uniprot.org/uniprot/P22256 P22256]
+
{{#set: reconstruction source=annotation-in-silico_annotation|annotation-experimental_annotation}}
−
** [http://www.uniprot.org/uniprot/P50457 P50457]
+
{{#set: reconstruction tool=pathwaytools}}
−
** [http://www.uniprot.org/uniprot/Q9UZ71 Q9UZ71]
+
−
** [http://www.uniprot.org/uniprot/P50554 P50554]
+
−
** [http://www.uniprot.org/uniprot/P80404 P80404]
+
−
** [http://www.uniprot.org/uniprot/P14010 P14010]
+
−
** [http://www.uniprot.org/uniprot/P17649 P17649]
+
−
** [http://www.uniprot.org/uniprot/P40829 P40829]
+
−
** [http://www.uniprot.org/uniprot/O13837 O13837]
+
−
{{#set: direction=REVERSIBLE}}
+
−
{{#set: ec number=EC-2.6.1.19}}
+
−
{{#set: gene associated=Tiso_gene_11231}}
+
−
{{#set: in pathway=PWY-4321|GLUDEG-I-PWY|P181-PWY|PWY-5022|PWY-6537|PWY-6536|PWY-6535}}
+
−
{{#set: reconstruction category=orthology}}
+
−
{{#set: reconstruction source=orthology-synechocystis}}
+
−
{{#set: reconstruction tool=pantograph}}
+

Latest revision as of 21:26, 21 March 2018

Reaction RXN-17858

Reaction Formula

Genes associated with this reaction

Pathways

  • PWY-7800, Ac/N-end rule pathway: PWY-7800
    • 21 reactions found over 21 reactions in the full pathway

Reconstruction information

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=RXN-17858&oldid=48718"