Difference between revisions of "RXN-17876"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=3-HYDROXY-N6N6N6-TRIMETHYL-L-LYSINE 3-HYDROXY-N6N6N6-TRIMETHYL-L-LYSINE] == * smiles: ** C[N+](...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-17876 RXN-17876] == * direction: ** LEFT-TO-RIGHT * common name: ** methionine_aminopeptidase *...")
 
(3 intermediate revisions by the same user not shown)
Line 1: Line 1:
−
[[Category:Metabolite]]
+
[[Category:Reaction]]
−
== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=3-HYDROXY-N6N6N6-TRIMETHYL-L-LYSINE 3-HYDROXY-N6N6N6-TRIMETHYL-L-LYSINE] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-17876 RXN-17876] ==
−
* smiles:
+
* direction:
−
** C[N+](CCCC(C(C([O-])=O)[N+])O)(C)C
+
** LEFT-TO-RIGHT
−
* inchi key:
+
−
** InChIKey=ZRJHLGYVUCPZNH-MQWKRIRWSA-O
+
 
* common name:
 
* common name:
−
** 3-hydroxy-N6,N6,N6-trimethyl-L-lysine
+
** methionine_aminopeptidase
−
* molecular weight:
+
* ec number:
−
** 205.276   
+
** [http://enzyme.expasy.org/EC/3.4.11.18 EC-3.4.11.18]
 
* Synonym(s):
 
* Synonym(s):
−
** (5-amino-5-carboxy-4-hydroxy-pentyl)-trimethyl-ammonium
 
−
** 3-hydroxy-N6,N6,N6-trimethyl-L-lysin-N6-ium
 
  
−
== Reaction(s) known to consume the compound ==
+
== Reaction Formula ==
−
* [[RXN-9896]]
+
* With identifiers:
−
== Reaction(s) known to produce the compound ==
+
** 1 [[WATER]][c] '''+''' 1 [[L-methionyl-L-seryl-Protein]][c] '''=>''' 1 [[MET]][c] '''+''' 1 [[N-terminal-L-Serine]][c]
−
== Reaction(s) of unknown directionality ==
+
* With common name(s):
 +
** 1 H2O[c] '''+''' 1 an N-terminal-L-methionyl-L-seryl-[protein][c] '''=>''' 1 L-methionine[c] '''+''' 1 an N-terminal L-seryl-[protein][c]
 +
 
 +
== Genes associated with this reaction  ==
 +
Genes have been associated with this reaction based on different elements listed below.
 +
* Gene: [[Tiso_gene_5715]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: AUTOMATED-NAME-MATCH
 +
** Source: [[annotation-experimental_annotation]]
 +
*** Assignment: AUTOMATED-NAME-MATCH
 +
* Gene: [[Tiso_gene_4247]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: AUTOMATED-NAME-MATCH
 +
== Pathways  ==
 +
* [[PWY-7800]], Ac/N-end rule pathway: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7800 PWY-7800]
 +
** '''21''' reactions found over '''21''' reactions in the full pathway
 +
== Reconstruction information  ==
 +
* Category: [[annotation]]
 +
** Source: [[annotation-experimental_annotation]]
 +
*** Tool: [[pathwaytools]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
−
* LIGAND-CPD:
+
{{#set: direction=LEFT-TO-RIGHT}}
−
** [http://www.genome.jp/dbget-bin/www_bget?C01259 C01259]
+
{{#set: common name=methionine_aminopeptidase}}
−
* CHEBI:
+
{{#set: ec number=EC-3.4.11.18}}
−
** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=57515 57515]
+
{{#set: gene associated=Tiso_gene_5715|Tiso_gene_4247}}
−
* METABOLIGHTS : MTBLC57515
+
{{#set: in pathway=PWY-7800}}
−
* PUBCHEM:
+
{{#set: reconstruction category=annotation}}
−
** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=25203146 25203146]
+
{{#set: reconstruction source=annotation-experimental_annotation|annotation-in-silico_annotation}}
−
* HMDB : HMDB01422
+
{{#set: reconstruction tool=pathwaytools}}
−
{{#set: smiles=C[N+](CCCC(C(C([O-])=O)[N+])O)(C)C}}
+
−
{{#set: inchi key=InChIKey=ZRJHLGYVUCPZNH-MQWKRIRWSA-O}}
+
−
{{#set: common name=3-hydroxy-N6,N6,N6-trimethyl-L-lysine}}
+
−
{{#set: molecular weight=205.276    }}
+
−
{{#set: common name=(5-amino-5-carboxy-4-hydroxy-pentyl)-trimethyl-ammonium|3-hydroxy-N6,N6,N6-trimethyl-L-lysin-N6-ium}}
+
−
{{#set: consumed by=RXN-9896}}
+

Latest revision as of 21:10, 21 March 2018

Reaction RXN-17876

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • methionine_aminopeptidase
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-7800, Ac/N-end rule pathway: PWY-7800
    • 21 reactions found over 21 reactions in the full pathway

Reconstruction information

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=RXN-17876&oldid=46586"