Difference between revisions of "RXN-7605"

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(Created page with "Category:Gene == Gene Tiso_gene_18092 == * left end position: ** 50 * transcription direction: ** POSITIVE * right end position: ** 1860 * centisome position: ** 1.5356265...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-5464 RXN-5464] == * direction: ** LEFT-TO-RIGHT * common name: ** gdp-man:man_c_-pp-dol_alpha-_...")
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[[Category:Gene]]
+
[[Category:Reaction]]
== Gene Tiso_gene_18092 ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-5464 RXN-5464] ==
* left end position:
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* direction:
** 50
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** LEFT-TO-RIGHT
* transcription direction:
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* common name:
** POSITIVE
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** gdp-man:man_c_-pp-dol_alpha-_-mannosyltransferase
* right end position:
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* ec number:
** 1860
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** [http://enzyme.expasy.org/EC/2.4.1.131 EC-2.4.1.131]
* centisome position:
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** 1.5356265   
+
 
* Synonym(s):
 
* Synonym(s):
  
== Reactions associated ==
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== Reaction Formula ==
* [[PGPPHOSPHA-RXN]]
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* With identifiers:
** in-silico_annotation
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** 1 [[CPD-5162]][c] '''+''' 2 [[GDP-MANNOSE]][c] '''=>''' 2 [[GDP]][c] '''+''' 1 [[CPD-5164]][c] '''+''' 2 [[PROTON]][c]
***ec-number
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* With common name(s):
** experimental_annotation
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** 1 α-D-Man-(1→3)-[α-D-Man-(1→6)]-α-D-Man-(1→4)-β-D-GlcNAc-(1→4)-α-D-GlcNAc-diphosphodolichol[c] '''+''' 2 GDP-α-D-mannose[c] '''=>''' 2 GDP[c] '''+''' 1 α-D-Man-(1→2)-α-D-Man-(1→2)-α-D-Man-(1→3)-[α-D-Man-(1→6)]-β-D-Man-(1→4)-β-D-GlcNAc-(1→4)-α-D-GlcNAc-diphosphodolichol[c] '''+''' 2 H+[c]
***ec-number
+
 
* [[RXN-13313]]
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== Genes associated with this reaction  ==
** in-silico_annotation
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Genes have been associated with this reaction based on different elements listed below.
***ec-number
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* [[Tiso_gene_15372]]
** experimental_annotation
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** IN-SILICO_ANNOTATION
***ec-number
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***EC-NUMBER
== Pathways associated ==
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* [[Tiso_gene_15849]]
* [[PWY4FS-7]]
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** [[pantograph]]-[[esiliculosus]]
* [[PWY4FS-8]]
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== Pathways ==
* [[PWY-5269]]
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* [[MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS]], protein N-glycosylation (eukaryotic, high mannose): [http://metacyc.org/META/NEW-IMAGE?object=MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS]
* [[PWY-7817]]
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** '''19''' reactions found over '''19''' reactions in the full pathway
* [[PWY-5668]]
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== Reconstruction information  ==
* [[PWY0-1545]]
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* [[orthology]]:
 +
** [[pantograph]]:
 +
*** [[esiliculosus]]
 +
* [[annotation]]:
 +
** [[pathwaytools]]:
 +
*** [[in-silico_annotation]]
 
== External links  ==
 
== External links  ==
{{#set: left end position=50}}
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* RHEA:
{{#set: transcription direction=POSITIVE}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=29523 29523]
{{#set: right end position=1860}}
+
{{#set: direction=LEFT-TO-RIGHT}}
{{#set: centisome position=1.5356265    }}
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{{#set: common name=gdp-man:man_c_-pp-dol_alpha-_-mannosyltransferase}}
{{#set: reaction associated=PGPPHOSPHA-RXN|RXN-13313}}
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{{#set: ec number=EC-2.4.1.131}}
{{#set: pathway associated=PWY4FS-7|PWY4FS-8|PWY-5269|PWY-7817|PWY-5668|PWY0-1545}}
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{{#set: gene associated=Tiso_gene_15372|Tiso_gene_15849}}
 +
{{#set: in pathway=MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS}}
 +
{{#set: reconstruction category=orthology}}
 +
{{#set: reconstruction tool=pantograph}}
 +
{{#set: reconstruction source=esiliculosus}}
 +
{{#set: reconstruction category=annotation}}
 +
{{#set: reconstruction tool=pathwaytools}}
 +
{{#set: reconstruction source=in-silico_annotation}}

Revision as of 18:03, 10 January 2018

Reaction RXN-5464

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • gdp-man:man_c_-pp-dol_alpha-_-mannosyltransferase
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 α-D-Man-(1→3)-[α-D-Man-(1→6)]-α-D-Man-(1→4)-β-D-GlcNAc-(1→4)-α-D-GlcNAc-diphosphodolichol[c] + 2 GDP-α-D-mannose[c] => 2 GDP[c] + 1 α-D-Man-(1→2)-α-D-Man-(1→2)-α-D-Man-(1→3)-[α-D-Man-(1→6)]-β-D-Man-(1→4)-β-D-GlcNAc-(1→4)-α-D-GlcNAc-diphosphodolichol[c] + 2 H+[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links