Difference between revisions of "RXN-7605"

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(Created page with "Category:Gene == Gene Tiso_gene_5911 == * right end position: ** 6643 * transcription direction: ** NEGATIVE * left end position: ** 3327 * centisome position: ** 26.03897...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-7605 RXN-7605] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/2....")
 
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[[Category:Gene]]
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[[Category:Reaction]]
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== Gene Tiso_gene_5911 ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-7605 RXN-7605] ==
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* right end position:
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* direction:
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** 6643
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** LEFT-TO-RIGHT
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* transcription direction:
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* ec number:
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** NEGATIVE
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** [http://enzyme.expasy.org/EC/2.1.1 EC-2.1.1]
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* left end position:
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** 3327
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* centisome position:
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** 26.038977   
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* Synonym(s):
 
* Synonym(s):
  
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== Reactions associated ==
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== Reaction Formula ==
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* Reaction: [[5-NUCLEOTID-RXN]]
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* With identifiers:
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** Source: [[annotation-in-silico_annotation]]
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** 1 [[S-ADENOSYLMETHIONINE]][c] '''+''' 1 [[Demethylated-methyl-acceptors]][c] '''=>''' 1 [[ADENOSYL-HOMO-CYS]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[Methylated-methyl-acceptors]][c]
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*** Assignment: automated-name-match
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* With common name(s):
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* Reaction: [[AMP-DEPHOSPHORYLATION-RXN]]
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** 1 S-adenosyl-L-methionine[c] '''+''' 1 a demethylated methyl donor[c] '''=>''' 1 S-adenosyl-L-homocysteine[c] '''+''' 1 H+[c] '''+''' 1 a methylated methyl donor[c]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: automated-name-match
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== Genes associated with this reaction  ==
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* Reaction: [[NARP]]
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== Pathways  ==
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** Source: [[orthology-creinhardtii]]
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* [[METHIONINE-DEG1-PWY]], L-methionine degradation I (to L-homocysteine): [http://metacyc.org/META/NEW-IMAGE?object=METHIONINE-DEG1-PWY METHIONINE-DEG1-PWY]
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* Reaction: [[NRPH]]
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** '''3''' reactions found over '''3''' reactions in the full pathway
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** Source: [[orthology-creinhardtii]]
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* [[PWY-I9]], L-cysteine biosynthesis VI (from L-methionine): [http://metacyc.org/META/NEW-IMAGE?object=PWY-I9 PWY-I9]
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* Reaction: [[RXN-14025]]
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** '''5''' reactions found over '''7''' reactions in the full pathway
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** Source: [[annotation-in-silico_annotation]]
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* [[PWY-5041]], S-adenosyl-L-methionine cycle II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5041 PWY-5041]
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*** Assignment: automated-name-match
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** '''4''' reactions found over '''4''' reactions in the full pathway
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* Reaction: [[RXN-14026]]
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* [[PWY-6154]], autoinducer AI-2 biosynthesis II (Vibrio): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6154 PWY-6154]
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** Source: [[annotation-in-silico_annotation]]
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** '''2''' reactions found over '''6''' reactions in the full pathway
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*** Assignment: automated-name-match
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* [[PWY-6151]], S-adenosyl-L-methionine cycle I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6151 PWY-6151]
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* Reaction: [[RXN-14227]]
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** '''4''' reactions found over '''6''' reactions in the full pathway
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** Source: [[annotation-in-silico_annotation]]
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* [[PWY-6153]], autoinducer AI-2 biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6153 PWY-6153]
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*** Assignment: automated-name-match
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** '''2''' reactions found over '''5''' reactions in the full pathway
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* Reaction: [[RXN-5841]]
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== Reconstruction information  ==
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** Source: [[annotation-in-silico_annotation]]
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* Category: [[annotation]]
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*** Assignment: automated-name-match
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** Source: [[annotation-experimental_annotation]]
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* Reaction: [[RXN-7607]]
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*** Tool: [[pathwaytools]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: automated-name-match
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* Reaction: [[RXN-7609]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: automated-name-match
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* Reaction: [[XMPXAN-RXN]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: automated-name-match
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== Pathways associated ==
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* [[PWY-5381]]
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* [[PWY-6607]]
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* [[PWY-7185]]
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* [[PWY-7821]]
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* [[SALVADEHYPOX-PWY]]
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* [[PWY-6596]]
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* [[NAD-BIOSYNTHESIS-II]]
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* [[PWY-6606]]
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* [[PWY-6608]]
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* [[PWY-5695]]
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== External links  ==
 
== External links  ==
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{{#set: right end position=6643}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: transcription direction=NEGATIVE}}
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{{#set: ec number=EC-2.1.1}}
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{{#set: left end position=3327}}
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{{#set: in pathway=METHIONINE-DEG1-PWY|PWY-I9|PWY-5041|PWY-6154|PWY-6151|PWY-6153}}
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{{#set: centisome position=26.038977    }}
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{{#set: reconstruction category=annotation}}
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{{#set: reaction associated=5-NUCLEOTID-RXN|AMP-DEPHOSPHORYLATION-RXN|NARP|NRPH|RXN-14025|RXN-14026|RXN-14227|RXN-5841|RXN-7607|RXN-7609|XMPXAN-RXN}}
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{{#set: reconstruction source=annotation-experimental_annotation}}
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{{#set: pathway associated=PWY-5381|PWY-6607|PWY-7185|PWY-7821|SALVADEHYPOX-PWY|PWY-6596|NAD-BIOSYNTHESIS-II|PWY-6606|PWY-6608|PWY-5695}}
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{{#set: reconstruction tool=pathwaytools}}

Latest revision as of 21:04, 21 March 2018

Reaction RXN-7605

  • direction:
    • LEFT-TO-RIGHT
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Pathways

  • METHIONINE-DEG1-PWY, L-methionine degradation I (to L-homocysteine): METHIONINE-DEG1-PWY
    • 3 reactions found over 3 reactions in the full pathway
  • PWY-I9, L-cysteine biosynthesis VI (from L-methionine): PWY-I9
    • 5 reactions found over 7 reactions in the full pathway
  • PWY-5041, S-adenosyl-L-methionine cycle II: PWY-5041
    • 4 reactions found over 4 reactions in the full pathway
  • PWY-6154, autoinducer AI-2 biosynthesis II (Vibrio): PWY-6154
    • 2 reactions found over 6 reactions in the full pathway
  • PWY-6151, S-adenosyl-L-methionine cycle I: PWY-6151
    • 4 reactions found over 6 reactions in the full pathway
  • PWY-6153, autoinducer AI-2 biosynthesis I: PWY-6153
    • 2 reactions found over 5 reactions in the full pathway

Reconstruction information

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=RXN-7605&oldid=45676"