Difference between revisions of "RXN-7697"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-5098 RXN0-5098] == * direction: ** LEFT-TO-RIGHT * common name: ** lipoate-protein_ligase_a **...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-16096 RXN-16096] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/...")
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-5098 RXN0-5098] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-16096 RXN-16096] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
−
* common name:
 
−
** lipoate-protein_ligase_a
 
−
** lipoate-protein_ligase
 
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/6.3.1.20 EC-6.3.1.20]
+
** [http://enzyme.expasy.org/EC/4.2.1.134 EC-4.2.1.134]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[Lipoyl-Protein-L-Lysine]][c] '''+''' 1 [[CPD-195]][c] '''+''' 1 [[ATP]][c] '''=>''' 1 [[Octanoylated-domains]][c] '''+''' 1 [[AMP]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[PPI]][c]
+
** 1 [[CPD-17347]][c] '''=>''' 1 [[CPD-17348]][c] '''+''' 1 [[WATER]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 a [lipoyl-carrier protein]-L-lysine[c] '''+''' 1 octanoate[c] '''+''' 1 ATP[c] '''=>''' 1 a [lipoyl-carrier protein] N6-octanoyl-L-lysine[c] '''+''' 1 AMP[c] '''+''' 1 H+[c] '''+''' 1 diphosphate[c]
+
** 1 (3R)-hydroxy-(11Z,14Z)-icosa-11,14-dienoyl-CoA[c] '''=>''' 1 (2E, 11Z,14Z)-icosa-2,11,14-trienoyl-CoA[c] '''+''' 1 H2O[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
−
Genes have been associated with this reaction based on different elements listed below.
 
−
* [[Tiso_gene_8713]]
 
−
** IN-SILICO_ANNOTATION
 
−
***AUTOMATED-NAME-MATCH
 
−
* [[Tiso_gene_4494]]
 
−
** IN-SILICO_ANNOTATION
 
−
***AUTOMATED-NAME-MATCH
 
−
* [[Tiso_gene_4493]]
 
−
** IN-SILICO_ANNOTATION
 
−
***AUTOMATED-NAME-MATCH
 
−
* [[Tiso_gene_17215]]
 
−
** IN-SILICO_ANNOTATION
 
−
***AUTOMATED-NAME-MATCH
 
−
* [[Tiso_gene_17216]]
 
−
** IN-SILICO_ANNOTATION
 
−
***AUTOMATED-NAME-MATCH
 
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY0-1275]], lipoate biosynthesis and incorporation II: [http://metacyc.org/META/NEW-IMAGE?object=PWY0-1275 PWY0-1275]
+
* [[PWY-7601]], arachidonate biosynthesis IV (8-detaturase, lower eukaryotes): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7601 PWY-7601]
−
** '''2''' reactions found over '''2''' reactions in the full pathway
+
** '''7''' reactions found over '''7''' reactions in the full pathway
 +
* [[PWY-7725]], arachidonate biosynthesis V (8-detaturase, mammals): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7725 PWY-7725]
 +
** '''4''' reactions found over '''6''' reactions in the full pathway
 +
* [[PWY-6598]], sciadonate biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6598 PWY-6598]
 +
** '''4''' reactions found over '''5''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* Category: [[annotation]]
 
* Category: [[annotation]]
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== External links  ==
 
== External links  ==
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=lipoate-protein_ligase_a}}
+
{{#set: ec number=EC-4.2.1.134}}
−
{{#set: common name=lipoate-protein_ligase}}
+
{{#set: in pathway=PWY-7601|PWY-7725|PWY-6598}}
−
{{#set: ec number=EC-6.3.1.20}}
+
−
{{#set: gene associated=Tiso_gene_8713|Tiso_gene_4494|Tiso_gene_4493|Tiso_gene_17215|Tiso_gene_17216}}
+
−
{{#set: in pathway=PWY0-1275}}
+
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction source=annotation-in-silico_annotation}}
 
{{#set: reconstruction source=annotation-in-silico_annotation}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}

Revision as of 16:51, 21 March 2018

Reaction RXN-16096

  • direction:
    • LEFT-TO-RIGHT
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 (3R)-hydroxy-(11Z,14Z)-icosa-11,14-dienoyl-CoA[c] => 1 (2E, 11Z,14Z)-icosa-2,11,14-trienoyl-CoA[c] + 1 H2O[c]

Genes associated with this reaction

Pathways

  • PWY-7601, arachidonate biosynthesis IV (8-detaturase, lower eukaryotes): PWY-7601
    • 7 reactions found over 7 reactions in the full pathway
  • PWY-7725, arachidonate biosynthesis V (8-detaturase, mammals): PWY-7725
    • 4 reactions found over 6 reactions in the full pathway
  • PWY-6598, sciadonate biosynthesis: PWY-6598
    • 4 reactions found over 5 reactions in the full pathway

Reconstruction information

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=RXN-7697&oldid=36841"