Difference between revisions of "RXN-9538"

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(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-12906 CPD-12906] == * smiles: ** CC(C)=CC(=O)CC(=O)SCCNC(=O)CCNC(=O)C(O)C(C)(C)COP(=O)(OP(=...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-9538 RXN-9538] == * direction: ** LEFT-TO-RIGHT * common name: ** trans tetradec-2-enoyl-[acyl-...")
 
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[[Category:Metabolite]]
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[[Category:Reaction]]
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-12906 CPD-12906] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-9538 RXN-9538] ==
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* smiles:
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* direction:
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** CC(C)=CC(=O)CC(=O)SCCNC(=O)CCNC(=O)C(O)C(C)(C)COP(=O)(OP(=O)(OCC1(C(OP([O-])(=O)[O-])C(O)C(O1)N3(C2(=C(C(N)=NC=N2)N=C3))))[O-])[O-]
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** LEFT-TO-RIGHT
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* inchi key:
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** InChIKey=ZFKZVSUJTDSJEY-SVHODSNWSA-J
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* common name:
 
* common name:
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** 5-methyl-3-oxo-4-hexenoyl-CoA
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** trans tetradec-2-enoyl-[acyl-carrier-protein] reductase (NADPH, B-specific)
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* molecular weight:
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** polyketide_synthase
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** 887.641   
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* ec number:
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** [http://enzyme.expasy.org/EC/1.3.1.10 EC-1.3.1.10]
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** [http://enzyme.expasy.org/EC/1.3.1.39 EC-1.3.1.39]
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** [http://enzyme.expasy.org/EC/2.3.1.85 EC-2.3.1.85]
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** [http://enzyme.expasy.org/EC/2.3.1.86 EC-2.3.1.86]
 
* Synonym(s):
 
* Synonym(s):
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** trans tetradec-2-enoyl-[ACP] reductase
  
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== Reaction(s) known to consume the compound ==
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== Reaction Formula ==
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* [[RXN-11921]]
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* With identifiers:
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== Reaction(s) known to produce the compound ==
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** 1 [[NADPH]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[Tetradec-2-enoyl-ACPs]][c] '''=>''' 1 [[NADP]][c] '''+''' 1 [[Myristoyl-ACPs]][c]
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== Reaction(s) of unknown directionality ==
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* With common name(s):
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** 1 NADPH[c] '''+''' 1 H+[c] '''+''' 1 a trans tetradec-2-enoyl-[acp][c] '''=>''' 1 NADP+[c] '''+''' 1 a myristoyl-[acp][c]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* Gene: [[Tiso_gene_13394]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: EC-NUMBER
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* Gene: [[Tiso_gene_10778]]
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** Source: [[orthology-synechocystis]]
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* Gene: [[Tiso_gene_10876]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: EC-NUMBER
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* Gene: [[Tiso_gene_135]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: EC-NUMBER
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* Gene: [[Tiso_gene_136]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: EC-NUMBER
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* Gene: [[Tiso_gene_500]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: EC-NUMBER
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== Pathways  ==
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* [[PWY-5994]], palmitate biosynthesis I (animals and fungi): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5994 PWY-5994]
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** '''31''' reactions found over '''31''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-synechocystis]]
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*** Tool: [[pantograph]]
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* Category: [[manual]]
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** Source: [[manual-primary_network]]
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* Category: [[annotation]]
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** Source: [[annotation-in-silico_annotation]]
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*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
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* PUBCHEM:
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{{#set: direction=LEFT-TO-RIGHT}}
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** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=50986120 50986120]
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{{#set: common name=trans tetradec-2-enoyl-[acyl-carrier-protein] reductase (NADPH, B-specific)}}
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* LIGAND-CPD:
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{{#set: common name=polyketide_synthase}}
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** [http://www.genome.jp/dbget-bin/www_bget?C16471 C16471]
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{{#set: ec number=EC-1.3.1.10}}
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* HMDB : HMDB60399
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{{#set: ec number=EC-1.3.1.39}}
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{{#set: smiles=CC(C)=CC(=O)CC(=O)SCCNC(=O)CCNC(=O)C(O)C(C)(C)COP(=O)(OP(=O)(OCC1(C(OP([O-])(=O)[O-])C(O)C(O1)N3(C2(=C(C(N)=NC=N2)N=C3))))[O-])[O-]}}
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{{#set: ec number=EC-2.3.1.85}}
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{{#set: inchi key=InChIKey=ZFKZVSUJTDSJEY-SVHODSNWSA-J}}
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{{#set: ec number=EC-2.3.1.86}}
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{{#set: common name=5-methyl-3-oxo-4-hexenoyl-CoA}}
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{{#set: common name=trans tetradec-2-enoyl-[ACP] reductase}}
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{{#set: molecular weight=887.641    }}
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{{#set: gene associated=Tiso_gene_13394|Tiso_gene_10778|Tiso_gene_10876|Tiso_gene_135|Tiso_gene_136|Tiso_gene_500}}
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{{#set: consumed by=RXN-11921}}
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{{#set: in pathway=PWY-5994}}
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{{#set: reconstruction category=orthology|manual|annotation}}
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{{#set: reconstruction source=manual-primary_network|annotation-in-silico_annotation|orthology-synechocystis}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}

Latest revision as of 20:23, 21 March 2018

Reaction RXN-9538

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • trans tetradec-2-enoyl-[acyl-carrier-protein] reductase (NADPH, B-specific)
    • polyketide_synthase
  • ec number:
  • Synonym(s):
    • trans tetradec-2-enoyl-[ACP] reductase

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-5994, palmitate biosynthesis I (animals and fungi): PWY-5994
    • 31 reactions found over 31 reactions in the full pathway

Reconstruction information

External links

"trans tetradec-2-enoyl-[acyl-carrier-protein] reductase (NADPH, B-specific)" cannot be used as a page name in this wiki.



"trans tetradec-2-enoyl-[ACP] reductase" cannot be used as a page name in this wiki.



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