Difference between revisions of "RXN-9633"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=UDP-N-ACETYL-D-GLUCOSAMINE UDP-N-ACETYL-D-GLUCOSAMINE] == * smiles: ** CC(NC3(C(OP(OP(OCC1(C(C(...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-9633 RXN-9633] == * direction: ** LEFT-TO-RIGHT * common name: ** 3-oxo-stearoyl-[acyl-carrier...")
 
Line 1: Line 1:
−
[[Category:Metabolite]]
+
[[Category:Reaction]]
−
== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=UDP-N-ACETYL-D-GLUCOSAMINE UDP-N-ACETYL-D-GLUCOSAMINE] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-9633 RXN-9633] ==
−
* smiles:
+
* direction:
−
** CC(NC3(C(OP(OP(OCC1(C(C(C(O1)N2(C=CC(NC2=O)=O))O)O))([O-])=O)([O-])=O)OC(C(C3O)O)CO))=O
+
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** UDP-N-acetyl-α-D-glucosamine
+
** 3-oxo-stearoyl-[acyl-carrier protein] reductase
−
* inchi key:
+
** polyketide_synthase
−
** InChIKey=LFTYTUAZOPRMMI-CFRASDGPSA-L
+
** 3-oxoacyl-(acyl-carrier-protein)
−
* molecular weight:
+
* ec number:
−
** 605.342   
+
** [http://enzyme.expasy.org/EC/2.3.1.86 EC-2.3.1.86]
 +
** [http://enzyme.expasy.org/EC/1.1.1.100 EC-1.1.1.100]
 
* Synonym(s):
 
* Synonym(s):
−
** UDP-acetyl-D-glucosamine
 
−
** UDP-GlcNAc
 
−
** UDP-N-acetyl-glucosamine
 
−
** uridine diphosphate N-acetylglucosamine
 
−
** N-[2-[[[5-[(2,4-dioxo-1H-pyrimidin-1-yl)]-3,4-dihydroxy-tetrahydrofuran-2-yl]methoxy-hydroxy-phosphinoyl]oxy-hydroxy-phosphinoyl]oxy-4,5-dihydroxy-6-(hydroxymethyl)tetrahydropyran-3-yl]acetamide
 
−
** UDP-2-acetamido-2-deoxy-α-D-glucose
 
−
** UDP-N-acetyl-D-glucosamine
 
−
** UDP-α-N-acetyl-D-glucosamine
 
  
−
== Reaction(s) known to consume the compound ==
+
== Reaction Formula ==
−
* [[2.4.1.145-RXN]]
+
* With identifiers:
−
* [[2.4.1.223-RXN]]
+
** 1 [[3-oxo-stearoyl-ACPs]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[NADPH]][c] '''=>''' 1 [[R-3-hydroxystearoyl-ACPs]][c] '''+''' 1 [[NADP]][c]
−
* [[2.7.8.15-RXN]]
+
* With common name(s):
−
* [[UDPNACETYLGLUCOSAMACYLTRANS-RXN]]
+
** 1 a 3-oxo-stearoyl-[acp][c] '''+''' 1 H+[c] '''+''' 1 NADPH[c] '''=>''' 1 a (3R)-3-hydroxystearoyl-[acp][c] '''+''' 1 NADP+[c]
−
* [[2.4.1.224-RXN]]
+
 
−
* [[2.4.1.141-RXN]]
+
== Genes associated with this reaction  ==
−
== Reaction(s) known to produce the compound ==
+
Genes have been associated with this reaction based on different elements listed below.
−
* [[NAG1P-URIDYLTRANS-RXN]]
+
* Gene: [[Tiso_gene_10876]]
−
== Reaction(s) of unknown directionality ==
+
** Source: [[annotation-in-silico_annotation]]
−
* [[UDPGLCNACEPIM-RXN]]
+
*** Assignment: EC-NUMBER
−
* [[RXN-7873]]
+
* Gene: [[Tiso_gene_9885]]
−
* [[2.4.1.198-RXN]]
+
** Source: [[annotation-experimental_annotation]]
−
* [[2.4.1.229-RXN]]
+
*** Assignment: EC-NUMBER
 +
* Gene: [[Tiso_gene_136]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[Tiso_gene_135]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[Tiso_gene_500]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[Tiso_gene_13394]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[Tiso_gene_13083]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 +
** Source: [[annotation-experimental_annotation]]
 +
*** Assignment: EC-NUMBER
 +
** Source: [[orthology-esiliculosus]]
 +
== Pathways  ==
 +
* [[PWY-5989]], stearate biosynthesis II (bacteria and plants): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5989 PWY-5989]
 +
** '''5''' reactions found over '''6''' reactions in the full pathway
 +
* [[PWY3O-355]], stearate biosynthesis III (fungi): [http://metacyc.org/META/NEW-IMAGE?object=PWY3O-355 PWY3O-355]
 +
** '''6''' reactions found over '''6''' reactions in the full pathway
 +
== Reconstruction information  ==
 +
* Category: [[orthology]]
 +
** Source: [[orthology-esiliculosus]]
 +
*** Tool: [[pantograph]]
 +
* Category: [[manual]]
 +
** Source: [[manual-primary_network]]
 +
* Category: [[annotation]]
 +
** Source: [[annotation-experimental_annotation]]
 +
*** Tool: [[pathwaytools]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
−
* CAS : 528-04-1
+
{{#set: direction=LEFT-TO-RIGHT}}
−
* BIGG : uacgam
+
{{#set: common name=3-oxo-stearoyl-[acyl-carrier protein] reductase}}
−
* PUBCHEM:
+
{{#set: common name=polyketide_synthase}}
−
** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=16667373 16667373]
+
{{#set: common name=3-oxoacyl-(acyl-carrier-protein)}}
−
* HMDB : HMDB00290
+
{{#set: ec number=EC-2.3.1.86}}
−
* LIGAND-CPD:
+
{{#set: ec number=EC-1.1.1.100}}
−
** [http://www.genome.jp/dbget-bin/www_bget?C00043 C00043]
+
{{#set: gene associated=Tiso_gene_10876|Tiso_gene_9885|Tiso_gene_136|Tiso_gene_135|Tiso_gene_500|Tiso_gene_13394|Tiso_gene_13083}}
−
* CHEMSPIDER:
+
{{#set: in pathway=PWY-5989|PWY3O-355}}
−
** [http://www.chemspider.com/Chemical-Structure.17600409.html 17600409]
+
{{#set: reconstruction category=orthology|manual|annotation}}
−
* CHEBI:
+
{{#set: reconstruction source=annotation-experimental_annotation|manual-primary_network|annotation-in-silico_annotation|orthology-esiliculosus}}
−
** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=57705 57705]
+
{{#set: reconstruction tool=pantograph|pathwaytools}}
−
* METABOLIGHTS : MTBLC57705
+
−
{{#set: smiles=CC(NC3(C(OP(OP(OCC1(C(C(C(O1)N2(C=CC(NC2=O)=O))O)O))([O-])=O)([O-])=O)OC(C(C3O)O)CO))=O}}
+
−
{{#set: common name=UDP-N-acetyl-α-D-glucosamine}}
+
−
{{#set: inchi key=InChIKey=LFTYTUAZOPRMMI-CFRASDGPSA-L}}
+
−
{{#set: molecular weight=605.342    }}
+
−
{{#set: common name=UDP-acetyl-D-glucosamine|UDP-GlcNAc|UDP-N-acetyl-glucosamine|uridine diphosphate N-acetylglucosamine|N-[2-[[[5-[(2,4-dioxo-1H-pyrimidin-1-yl)]-3,4-dihydroxy-tetrahydrofuran-2-yl]methoxy-hydroxy-phosphinoyl]oxy-hydroxy-phosphinoyl]oxy-4,5-dihydroxy-6-(hydroxymethyl)tetrahydropyran-3-yl]acetamide|UDP-2-acetamido-2-deoxy-α-D-glucose|UDP-N-acetyl-D-glucosamine|UDP-α-N-acetyl-D-glucosamine}}
+
−
{{#set: consumed by=2.4.1.145-RXN|2.4.1.223-RXN|2.7.8.15-RXN|UDPNACETYLGLUCOSAMACYLTRANS-RXN|2.4.1.224-RXN|2.4.1.141-RXN}}
+
−
{{#set: produced by=NAG1P-URIDYLTRANS-RXN}}
+
−
{{#set: reversible reaction associated=UDPGLCNACEPIM-RXN|RXN-7873|2.4.1.198-RXN|2.4.1.229-RXN}}
+

Latest revision as of 21:17, 21 March 2018

Reaction RXN-9633

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • 3-oxo-stearoyl-[acyl-carrier protein] reductase
    • polyketide_synthase
    • 3-oxoacyl-(acyl-carrier-protein)
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-5989, stearate biosynthesis II (bacteria and plants): PWY-5989
    • 5 reactions found over 6 reactions in the full pathway
  • PWY3O-355, stearate biosynthesis III (fungi): PWY3O-355
    • 6 reactions found over 6 reactions in the full pathway

Reconstruction information

External links

"3-oxo-stearoyl-[acyl-carrier protein] reductase" cannot be used as a page name in this wiki.





Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=RXN-9633&oldid=47501"