Difference between revisions of "RXN-9644"

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(Created page with "Category:Gene == Gene Tiso_gene_3977 == * right end position: ** 24325 * transcription direction: ** POSITIVE * left end position: ** 20843 * centisome position: ** 80.162...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-9644 RXN-9644] == * direction: ** LEFT-TO-RIGHT * common name: ** long_chain_acyl-_synthetase *...")
 
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[[Category:Gene]]
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[[Category:Reaction]]
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== Gene Tiso_gene_3977 ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-9644 RXN-9644] ==
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* right end position:
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* direction:
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** 24325
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** LEFT-TO-RIGHT
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* transcription direction:
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* common name:
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** POSITIVE
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** long_chain_acyl-_synthetase
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* left end position:
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** polyketide_synthase
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** 20843
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** acyl-_synthetase
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* centisome position:
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** ORF
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** 80.1623   
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* ec number:
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** [http://enzyme.expasy.org/EC/6.2.1.3 EC-6.2.1.3]
 
* Synonym(s):
 
* Synonym(s):
  
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== Reactions associated ==
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== Reaction Formula ==
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* Reaction: [[HISTONE-LYSINE-N-METHYLTRANSFERASE-RXN]]
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* With identifiers:
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** 1 [[OLEATE-CPD]][c] '''+''' 1 [[ATP]][c] '''+''' 1 [[CO-A]][c] '''=>''' 1 [[PPI]][c] '''+''' 1 [[OLEOYL-COA]][c] '''+''' 1 [[AMP]][c]
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* With common name(s):
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** 1 oleate[c] '''+''' 1 ATP[c] '''+''' 1 coenzyme A[c] '''=>''' 1 diphosphate[c] '''+''' 1 oleoyl-CoA[c] '''+''' 1 AMP[c]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* Gene: [[Tiso_gene_4191]]
 
** Source: [[annotation-in-silico_annotation]]
 
** Source: [[annotation-in-silico_annotation]]
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*** Assignment: ec-number
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*** Assignment: EC-NUMBER
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** Source: [[annotation-experimental_annotation]]
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*** Assignment: EC-NUMBER
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* Gene: [[Tiso_gene_135]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: EC-NUMBER
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* Gene: [[Tiso_gene_10876]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: EC-NUMBER
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* Gene: [[Tiso_gene_13394]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: EC-NUMBER
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* Gene: [[Tiso_gene_7855]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: EC-NUMBER
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* Gene: [[Tiso_gene_136]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: EC-NUMBER
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* Gene: [[Tiso_gene_348]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: EC-NUMBER
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** Source: [[annotation-experimental_annotation]]
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*** Assignment: EC-NUMBER
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* Gene: [[Tiso_gene_500]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: EC-NUMBER
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* Gene: [[Tiso_gene_9394]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: EC-NUMBER
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** Source: [[annotation-experimental_annotation]]
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*** Assignment: EC-NUMBER
 
** Source: [[orthology-esiliculosus]]
 
** Source: [[orthology-esiliculosus]]
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* Reaction: [[PROTEIN-KINASE-RXN]]
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== Pathways  ==
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* [[PWY-5147]], oleate biosynthesis I (plants): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5147 PWY-5147]
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** '''3''' reactions found over '''3''' reactions in the full pathway
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* [[PWY-6001]], linoleate biosynthesis II (animals): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6001 PWY-6001]
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** '''1''' reactions found over '''2''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
 
** Source: [[orthology-esiliculosus]]
 
** Source: [[orthology-esiliculosus]]
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* Reaction: [[RXN-11201]]
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*** Tool: [[pantograph]]
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** Source: [[orthology-esiliculosus]]
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* Category: [[annotation]]
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== Pathways associated ==
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** Source: [[annotation-in-silico_annotation]]
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*** Tool: [[pathwaytools]]
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** Source: [[annotation-experimental_annotation]]
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*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
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{{#set: right end position=24325}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: transcription direction=POSITIVE}}
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{{#set: common name=long_chain_acyl-_synthetase}}
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{{#set: left end position=20843}}
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{{#set: common name=polyketide_synthase}}
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{{#set: centisome position=80.1623    }}
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{{#set: common name=acyl-_synthetase}}
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{{#set: reaction associated=HISTONE-LYSINE-N-METHYLTRANSFERASE-RXN|PROTEIN-KINASE-RXN|RXN-11201}}
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{{#set: common name=ORF}}
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{{#set: ec number=EC-6.2.1.3}}
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{{#set: gene associated=Tiso_gene_4191|Tiso_gene_135|Tiso_gene_10876|Tiso_gene_13394|Tiso_gene_7855|Tiso_gene_136|Tiso_gene_348|Tiso_gene_500|Tiso_gene_9394}}
 +
{{#set: in pathway=PWY-5147|PWY-6001}}
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{{#set: reconstruction category=orthology|annotation}}
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{{#set: reconstruction source=annotation-in-silico_annotation|annotation-experimental_annotation|orthology-esiliculosus}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}

Latest revision as of 21:02, 21 March 2018

Reaction RXN-9644

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • long_chain_acyl-_synthetase
    • polyketide_synthase
    • acyl-_synthetase
    • ORF
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 oleate[c] + 1 ATP[c] + 1 coenzyme A[c] => 1 diphosphate[c] + 1 oleoyl-CoA[c] + 1 AMP[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-5147, oleate biosynthesis I (plants): PWY-5147
    • 3 reactions found over 3 reactions in the full pathway
  • PWY-6001, linoleate biosynthesis II (animals): PWY-6001
    • 1 reactions found over 2 reactions in the full pathway

Reconstruction information

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=RXN-9644&oldid=45382"