Difference between revisions of "RXN0-1321"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-14228 RXN-14228] == * direction: ** REVERSIBLE * common name: ** ORF ** adenylate_kinase_domain...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-1321 RXN0-1321] == * direction: ** LEFT-TO-RIGHT * common name: ** queuine_trna-ribosyltransfe...")
 
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-14228 RXN-14228] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-1321 RXN0-1321] ==
 
* direction:
 
* direction:
−
** REVERSIBLE
+
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** ORF
+
** queuine_trna-ribosyltransferase
−
** adenylate_kinase_domain-containing_protein_1
+
−
** nucleoside_diphosphate_kinase
+
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/2.7.4.6 EC-2.7.4.6]
+
** [http://enzyme.expasy.org/EC/2.4.2.29 EC-2.4.2.29]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[ATP]][c] '''+''' 1 [[CPD0-2231]][c] '''<=>''' 1 [[ADP]][c] '''+''' 1 [[DITP]][c]
+
** 1 [[7-AMINOMETHYL-7-DEAZAGUANINE]][c] '''+''' 1 [[Guanine34-in-tRNAs]][c] '''=>''' 1 [[GUANINE]][c] '''+''' 1 [[tRNA-with-7-aminomethyl-7-deazaguanine]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 ATP[c] '''+''' 1 dIDP[c] '''<=>''' 1 ADP[c] '''+''' 1 dITP[c]
+
** 1 preQ1[c] '''+''' 1 a guanine34 in tRNA[c] '''=>''' 1 guanine[c] '''+''' 1 a 7-aminomethyl-7-deazaguanosine34 in tRNA[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* Gene: [[Tiso_gene_195]]
+
* Gene: [[Tiso_gene_18857]]
 
** Source: [[annotation-in-silico_annotation]]
 
** Source: [[annotation-in-silico_annotation]]
 
*** Assignment: EC-NUMBER
 
*** Assignment: EC-NUMBER
−
* Gene: [[Tiso_gene_16529]]
+
** Source: [[orthology-esiliculosus]]
 +
* Gene: [[Tiso_gene_17]]
 
** Source: [[annotation-in-silico_annotation]]
 
** Source: [[annotation-in-silico_annotation]]
 
*** Assignment: EC-NUMBER
 
*** Assignment: EC-NUMBER
−
** Source: [[annotation-experimental_annotation]]
 
−
*** Assignment: EC-NUMBER
 
−
** Source: [[orthology-athaliana]]
 
 
** Source: [[orthology-esiliculosus]]
 
** Source: [[orthology-esiliculosus]]
−
* Gene: [[Tiso_gene_9290]]
+
* Gene: [[Tiso_gene_12326]]
−
** Source: [[annotation-in-silico_annotation]]
+
** Source: [[orthology-esiliculosus]]
−
*** Assignment: EC-NUMBER
+
−
* Gene: [[Tiso_gene_17272]]
+
−
** Source: [[annotation-in-silico_annotation]]
+
−
*** Assignment: EC-NUMBER
+
−
* Gene: [[Tiso_gene_17271]]
+
−
** Source: [[annotation-in-silico_annotation]]
+
−
*** Assignment: EC-NUMBER
+
−
* Gene: [[Tiso_gene_18224]]
+
−
** Source: [[annotation-in-silico_annotation]]
+
−
*** Assignment: EC-NUMBER
+
 
== Pathways  ==
 
== Pathways  ==
 +
* [[PWY-6700]], queuosine biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6700 PWY-6700]
 +
** '''2''' reactions found over '''4''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* Category: [[orthology]]
 
* Category: [[orthology]]
−
** Source: [[orthology-athaliana]]
 
−
*** Tool: [[pantograph]]
 
 
** Source: [[orthology-esiliculosus]]
 
** Source: [[orthology-esiliculosus]]
 
*** Tool: [[pantograph]]
 
*** Tool: [[pantograph]]
 
* Category: [[annotation]]
 
* Category: [[annotation]]
−
** Source: [[annotation-experimental_annotation]]
 
−
*** Tool: [[pathwaytools]]
 
 
** Source: [[annotation-in-silico_annotation]]
 
** Source: [[annotation-in-silico_annotation]]
 
*** Tool: [[pathwaytools]]
 
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
−
* RHEA:
 
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=30942 30942]
 
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R03530 R03530]
+
** [http://www.genome.jp/dbget-bin/www_bget?R10209 R10209]
−
{{#set: direction=REVERSIBLE}}
+
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=ORF}}
+
{{#set: common name=queuine_trna-ribosyltransferase}}
−
{{#set: common name=adenylate_kinase_domain-containing_protein_1}}
+
{{#set: ec number=EC-2.4.2.29}}
−
{{#set: common name=nucleoside_diphosphate_kinase}}
+
{{#set: gene associated=Tiso_gene_18857|Tiso_gene_17|Tiso_gene_12326}}
−
{{#set: ec number=EC-2.7.4.6}}
+
{{#set: in pathway=PWY-6700}}
−
{{#set: gene associated=Tiso_gene_195|Tiso_gene_16529|Tiso_gene_9290|Tiso_gene_17272|Tiso_gene_17271|Tiso_gene_18224}}
+
−
{{#set: in pathway=}}
+
 
{{#set: reconstruction category=orthology|annotation}}
 
{{#set: reconstruction category=orthology|annotation}}
−
{{#set: reconstruction source=annotation-experimental_annotation|orthology-athaliana|annotation-in-silico_annotation|orthology-esiliculosus}}
+
{{#set: reconstruction source=annotation-in-silico_annotation|orthology-esiliculosus}}
 
{{#set: reconstruction tool=pantograph|pathwaytools}}
 
{{#set: reconstruction tool=pantograph|pathwaytools}}

Latest revision as of 21:25, 21 March 2018

Reaction RXN0-1321

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • queuine_trna-ribosyltransferase
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-6700, queuosine biosynthesis: PWY-6700
    • 2 reactions found over 4 reactions in the full pathway

Reconstruction information

External links





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