Difference between revisions of "RXN0-1401"

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(Created page with "Category:Gene == Gene Tiso_gene_12201 == * left end position: ** 4780 * transcription direction: ** POSITIVE * right end position: ** 7218 * centisome position: ** 66.1683...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-1401 RXN0-1401] == * direction: ** LEFT-TO-RIGHT * common name: ** thymidine_phosphorylase * e...")
 
(One intermediate revision by the same user not shown)
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[[Category:Gene]]
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[[Category:Reaction]]
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== Gene Tiso_gene_12201 ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-1401 RXN0-1401] ==
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* left end position:
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* direction:
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** 4780
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** LEFT-TO-RIGHT
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* transcription direction:
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* common name:
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** POSITIVE
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** thymidine_phosphorylase
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* right end position:
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* ec number:
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** 7218
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** [http://enzyme.expasy.org/EC/2.7.4.23 EC-2.7.4.23]
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* centisome position:
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** 66.16833   
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* Synonym(s):
 
* Synonym(s):
  
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== Reactions associated ==
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== Reaction Formula ==
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* [[HOLO-ACP-SYNTH-RXN]]
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* With identifiers:
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** in-silico_annotation
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** 1 [[RIBOSE-15-BISPHOSPHATE]][c] '''+''' 1 [[ATP]][c] '''=>''' 1 [[PRPP]][c] '''+''' 1 [[ADP]][c]
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***automated-name-match
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* With common name(s):
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** [[pantograph]]-[[esiliculosus]]
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** 1 α-D-ribose 1,5-bisphosphate[c] '''+''' 1 ATP[c] '''=>''' 1 5-phospho-α-D-ribose 1-diphosphate[c] '''+''' 1 ADP[c]
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== Pathways associated ==
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* [[PWY-6012-1]]
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== Genes associated with this reaction  ==
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* [[PWY-6012]]
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Genes have been associated with this reaction based on different elements listed below.
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* Gene: [[Tiso_gene_1011]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: EC-NUMBER
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== Pathways  ==
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* [[PWY-7805]], aminomethylphosphonate degradation: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7805 PWY-7805]
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** '''2''' reactions found over '''8''' reactions in the full pathway
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* [[PWY0-661]], PRPP biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=PWY0-661 PWY0-661]
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** '''1''' reactions found over '''3''' reactions in the full pathway
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* [[PWY-7807]], glyphosate degradation III: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7807 PWY-7807]
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** '''2''' reactions found over '''7''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[annotation]]
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** Source: [[annotation-in-silico_annotation]]
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*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
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{{#set: left end position=4780}}
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* RHEA:
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{{#set: transcription direction=POSITIVE}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=20109 20109]
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{{#set: right end position=7218}}
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* LIGAND-RXN:
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{{#set: centisome position=66.16833    }}
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** [http://www.genome.jp/dbget-bin/www_bget?R06836 R06836]
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{{#set: reaction associated=HOLO-ACP-SYNTH-RXN}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: pathway associated=PWY-6012-1|PWY-6012}}
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{{#set: common name=thymidine_phosphorylase}}
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{{#set: ec number=EC-2.7.4.23}}
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{{#set: gene associated=Tiso_gene_1011}}
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{{#set: in pathway=PWY-7805|PWY0-661|PWY-7807}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction source=annotation-in-silico_annotation}}
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{{#set: reconstruction tool=pathwaytools}}

Latest revision as of 21:03, 21 March 2018

Reaction RXN0-1401

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • thymidine_phosphorylase
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 α-D-ribose 1,5-bisphosphate[c] + 1 ATP[c] => 1 5-phospho-α-D-ribose 1-diphosphate[c] + 1 ADP[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-7805, aminomethylphosphonate degradation: PWY-7805
    • 2 reactions found over 8 reactions in the full pathway
  • PWY0-661, PRPP biosynthesis II: PWY0-661
    • 1 reactions found over 3 reactions in the full pathway
  • PWY-7807, glyphosate degradation III: PWY-7807
    • 2 reactions found over 7 reactions in the full pathway

Reconstruction information

External links





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