Difference between revisions of "RXN0-2381"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=GAMMA-GLUTAMYLCYCLOTRANSFERASE-RXN GAMMA-GLUTAMYLCYCLOTRANSFERASE-RXN] == * direction: ** LEFT-TO-R...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-2381 RXN0-2381] == * direction: ** REVERSIBLE * common name: ** tryptophan_synthase_(alpha_bet...")
 
(One intermediate revision by the same user not shown)
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[[Category:Reaction]]
 
[[Category:Reaction]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=GAMMA-GLUTAMYLCYCLOTRANSFERASE-RXN GAMMA-GLUTAMYLCYCLOTRANSFERASE-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-2381 RXN0-2381] ==
 
* direction:
 
* direction:
−
** LEFT-TO-RIGHT
+
** REVERSIBLE
 
* common name:
 
* common name:
−
** ORF
+
** tryptophan_synthase_(alpha_beta_chains)
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/2.3.2.4 EC-2.3.2.4]
+
** [http://enzyme.expasy.org/EC/4.1.2.8 EC-4.1.2.8]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[5-L-GLUTAMYL-L-AMINO-ACID]][c] '''=>''' 1 [[5-OXOPROLINE]][c] '''+''' 1 [[L-Amino-Acids]][c]
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** 1 [[INDOLE-3-GLYCEROL-P]][c] '''<=>''' 1 [[INDOLE]][c] '''+''' 1 [[GAP]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 an (&gamma;-L-glutamyl)-L-amino acid[c] '''=>''' 1 5-oxo-L-proline[c] '''+''' 1 an L-amino acid[c]
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** 1 (1S,2R)-1-C-(indol-3-yl)glycerol 3-phosphate[c] '''<=>''' 1 indole[c] '''+''' 1 D-glyceraldehyde 3-phosphate[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Tiso_gene_1510]]
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* Gene: [[Tiso_gene_17207]]
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** IN-SILICO_ANNOTATION
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** Source: [[orthology-esiliculosus]]
−
***EC-NUMBER
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* Gene: [[Tiso_gene_4604]]
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* [[Tiso_gene_1247]]
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** Source: [[annotation-in-silico_annotation]]
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** [[pantograph]]-[[esiliculosus]]
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*** Assignment: EC-NUMBER
 +
** Source: [[annotation-experimental_annotation]]
 +
*** Assignment: EC-NUMBER
 +
** Source: [[orthology-esiliculosus]]
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY-4041]], &gamma;-glutamyl cycle: [http://metacyc.org/META/NEW-IMAGE?object=PWY-4041 PWY-4041]
+
* [[TRPSYN-PWY]], L-tryptophan biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=TRPSYN-PWY TRPSYN-PWY]
−
** '''5''' reactions found over '''6''' reactions in the full pathway
+
** '''6''' reactions found over '''6''' reactions in the full pathway
 +
* [[PWY-6949]], DIBOA-glucoside biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6949 PWY-6949]
 +
** '''1''' reactions found over '''6''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* Category: [[orthology]]
 
* Category: [[orthology]]
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*** Tool: [[pantograph]]
 
*** Tool: [[pantograph]]
 
* Category: [[annotation]]
 
* Category: [[annotation]]
 +
** Source: [[annotation-experimental_annotation]]
 +
*** Tool: [[pathwaytools]]
 
** Source: [[annotation-in-silico_annotation]]
 
** Source: [[annotation-in-silico_annotation]]
 
*** Tool: [[pathwaytools]]
 
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
 +
* RHEA:
 +
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=14081 14081]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R03749 R03749]
+
** [http://www.genome.jp/dbget-bin/www_bget?R02340 R02340]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: direction=REVERSIBLE}}
−
{{#set: common name=ORF}}
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{{#set: common name=tryptophan_synthase_(alpha_beta_chains)}}
−
{{#set: ec number=EC-2.3.2.4}}
+
{{#set: ec number=EC-4.1.2.8}}
−
{{#set: gene associated=Tiso_gene_1510|Tiso_gene_1247}}
+
{{#set: gene associated=Tiso_gene_17207|Tiso_gene_4604}}
−
{{#set: in pathway=PWY-4041}}
+
{{#set: in pathway=TRPSYN-PWY|PWY-6949}}
 
{{#set: reconstruction category=orthology|annotation}}
 
{{#set: reconstruction category=orthology|annotation}}
−
{{#set: reconstruction source=annotation-in-silico_annotation|orthology-esiliculosus}}
+
{{#set: reconstruction source=annotation-experimental_annotation|annotation-in-silico_annotation|orthology-esiliculosus}}
 
{{#set: reconstruction tool=pantograph|pathwaytools}}
 
{{#set: reconstruction tool=pantograph|pathwaytools}}

Latest revision as of 20:25, 21 March 2018

Reaction RXN0-2381

  • direction:
    • REVERSIBLE
  • common name:
    • tryptophan_synthase_(alpha_beta_chains)
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 (1S,2R)-1-C-(indol-3-yl)glycerol 3-phosphate[c] <=> 1 indole[c] + 1 D-glyceraldehyde 3-phosphate[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • TRPSYN-PWY, L-tryptophan biosynthesis: TRPSYN-PWY
    • 6 reactions found over 6 reactions in the full pathway
  • PWY-6949, DIBOA-glucoside biosynthesis: PWY-6949
    • 1 reactions found over 6 reactions in the full pathway

Reconstruction information

External links





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