Difference between revisions of "RXN0-5462"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=ARGSUCCINLYA-RXN ARGSUCCINLYA-RXN] == * direction: ** REVERSIBLE * common name: ** argininosuccinat...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-17855 RXN-17855] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/...")
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[[Category:Reaction]]
 
[[Category:Reaction]]
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=ARGSUCCINLYA-RXN ARGSUCCINLYA-RXN] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-17855 RXN-17855] ==
 
* direction:
 
* direction:
** REVERSIBLE
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** LEFT-TO-RIGHT
* common name:
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** argininosuccinate_lyase
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* ec number:
 
* ec number:
** [http://enzyme.expasy.org/EC/4.3.2.1 EC-4.3.2.1]
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** [http://enzyme.expasy.org/EC/2.3.1.bv EC-2.3.1.bv]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
** 1 [[L-ARGININO-SUCCINATE]][c] '''<=>''' 1 [[ARG]][c] '''+''' 1 [[FUM]][c]
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** 1 [[ACETYL-COA]][c] '''+''' 1 [[L-methionyl-L-isoleucyl-Protein]][c] '''=>''' 1 [[CO-A]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[N-Ac-L-methionyl-L-isoleucyl-Protein]][c]
 
* With common name(s):
 
* With common name(s):
** 1 L-arginino-succinate[c] '''<=>''' 1 L-arginine[c] '''+''' 1 fumarate[c]
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** 1 acetyl-CoA[c] '''+''' 1 an N-terminal-L-methionyl-L-isoleucyl-[protein][c] '''=>''' 1 coenzyme A[c] '''+''' 1 H+[c] '''+''' 1 an N-terminal N&alpha;-acetyl-L-methionyl-L-isoleucyl-[protein][c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
Genes have been associated with this reaction based on different elements listed below.
 
* [[Tiso_gene_2485]]
 
** IN-SILICO_ANNOTATION
 
***EC-NUMBER
 
** EXPERIMENTAL_ANNOTATION
 
***EC-NUMBER
 
** [[pantograph]]-[[athaliana]]
 
** [[pantograph]]-[[synechocystis]]
 
** [[pantograph]]-[[esiliculosus]]
 
** [[pantograph]]-[[creinhardtii]]
 
 
== Pathways  ==
 
== Pathways  ==
* [[PWY-4984]], urea cycle: [http://metacyc.org/META/NEW-IMAGE?object=PWY-4984 PWY-4984]
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* [[PWY-7800]], Ac/N-end rule pathway: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7800 PWY-7800]
** '''5''' reactions found over '''5''' reactions in the full pathway
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** '''21''' reactions found over '''21''' reactions in the full pathway
* [[ARGSYN-PWY]], L-arginine biosynthesis I (via L-ornithine): [http://metacyc.org/META/NEW-IMAGE?object=ARGSYN-PWY ARGSYN-PWY]
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** '''5''' reactions found over '''6''' reactions in the full pathway
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* [[PWY-5154]], L-arginine biosynthesis III (via N-acetyl-L-citrulline): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5154 PWY-5154]
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** '''7''' reactions found over '''9''' reactions in the full pathway
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* [[ARGSYNBSUB-PWY]], L-arginine biosynthesis II (acetyl cycle): [http://metacyc.org/META/NEW-IMAGE?object=ARGSYNBSUB-PWY ARGSYNBSUB-PWY]
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** '''9''' reactions found over '''9''' reactions in the full pathway
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* [[PWY-4983]], L-citrulline-nitric oxide cycle: [http://metacyc.org/META/NEW-IMAGE?object=PWY-4983 PWY-4983]
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** '''2''' reactions found over '''3''' reactions in the full pathway
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* [[PWY-7400]], L-arginine biosynthesis IV (archaebacteria): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7400 PWY-7400]
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** '''7''' reactions found over '''9''' reactions in the full pathway
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== Reconstruction information  ==
 
== Reconstruction information  ==
* [[orthology]]:
 
** [[pantograph]]:
 
*** [[creinhardtii]]
 
*** [[synechocystis]]
 
*** [[athaliana]]
 
*** [[esiliculosus]]
 
* [[manual]]:
 
** [[primary_network]]
 
 
* [[annotation]]:
 
* [[annotation]]:
 
** [[pathwaytools]]:
 
** [[pathwaytools]]:
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*** [[in-silico_annotation]]
 
*** [[in-silico_annotation]]
 
== External links  ==
 
== External links  ==
* RHEA:
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{{#set: direction=LEFT-TO-RIGHT}}
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=24020 24020]
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{{#set: ec number=EC-2.3.1.bv}}
* LIGAND-RXN:
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{{#set: in pathway=PWY-7800}}
** [http://www.genome.jp/dbget-bin/www_bget?R01086 R01086]
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* UNIPROT:
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** [http://www.uniprot.org/uniprot/P50987 P50987]
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** [http://www.uniprot.org/uniprot/Q46104 Q46104]
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** [http://www.uniprot.org/uniprot/P11447 P11447]
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** [http://www.uniprot.org/uniprot/Q9JVG7 Q9JVG7]
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** [http://www.uniprot.org/uniprot/Q9CJ76 Q9CJ76]
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** [http://www.uniprot.org/uniprot/P44314 P44314]
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** [http://www.uniprot.org/uniprot/Q58201 Q58201]
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** [http://www.uniprot.org/uniprot/P33110 P33110]
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** [http://www.uniprot.org/uniprot/Q01592 Q01592]
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** [http://www.uniprot.org/uniprot/P40369 P40369]
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** [http://www.uniprot.org/uniprot/P50988 P50988]
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** [http://www.uniprot.org/uniprot/P73257 P73257]
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** [http://www.uniprot.org/uniprot/P50514 P50514]
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** [http://www.uniprot.org/uniprot/P04076 P04076]
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** [http://www.uniprot.org/uniprot/P04424 P04424]
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** [http://www.uniprot.org/uniprot/P20673 P20673]
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{{#set: direction=REVERSIBLE}}
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{{#set: common name=argininosuccinate_lyase}}
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{{#set: ec number=EC-4.3.2.1}}
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{{#set: gene associated=Tiso_gene_2485}}
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{{#set: in pathway=PWY-4984|ARGSYN-PWY|PWY-5154|ARGSYNBSUB-PWY|PWY-4983|PWY-7400}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction tool=pantograph}}
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{{#set: reconstruction source=creinhardtii|synechocystis|athaliana|esiliculosus}}
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{{#set: reconstruction category=manual}}
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{{#set: reconstruction source=primary_network}}
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{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction source=experimental_annotation|in-silico_annotation}}
 
{{#set: reconstruction source=experimental_annotation|in-silico_annotation}}

Revision as of 18:40, 10 January 2018

Reaction RXN-17855

  • direction:
    • LEFT-TO-RIGHT
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Pathways

  • PWY-7800, Ac/N-end rule pathway: PWY-7800
    • 21 reactions found over 21 reactions in the full pathway

Reconstruction information

External links