Difference between revisions of "RXN0-7239"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=L-IDITOL-2-DEHYDROGENASE-RXN L-IDITOL-2-DEHYDROGENASE-RXN] == * direction: ** REVERSIBLE * common n...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-10708 RXN-10708] == * direction: ** LEFT-TO-RIGHT * common name: ** acyl-coenzyme_a_thioesteras...")
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=L-IDITOL-2-DEHYDROGENASE-RXN L-IDITOL-2-DEHYDROGENASE-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-10708 RXN-10708] ==
 
* direction:
 
* direction:
−
** REVERSIBLE
+
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** l-iditol_2-dehydrogenase
+
** acyl-coenzyme_a_thioesterase_mitochondrial-like
−
** polyketide_synthase
+
** thioesterase_superfamily_member_2
 +
** ORF
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/1.1.1.14 EC-1.1.1.14]
+
** [http://enzyme.expasy.org/EC/3.1.2.20 EC-3.1.2.20]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[NAD]][c] '''+''' 1 [[CPD-369]][c] '''<=>''' 1 [[CPD-15616]][c] '''+''' 1 [[NADH]][c] '''+''' 1 [[PROTON]][c]
+
** 1 [[WATER]][c] '''+''' 1 [[CPD-11529]][c] '''=>''' 1 [[CPD-731]][c] '''+''' 1 [[CO-A]][c] '''+''' 1 [[PROTON]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 NAD+[c] '''+''' 1 L-iditol[c] '''<=>''' 1 keto-L-sorbose[c] '''+''' 1 NADH[c] '''+''' 1 H+[c]
+
** 1 H2O[c] '''+''' 1 jasmonoyl-CoA[c] '''=>''' 1 (+)-7-iso-jasmonate[c] '''+''' 1 coenzyme A[c] '''+''' 1 H+[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Tiso_gene_5424]]
+
* [[Tiso_gene_7477]]
 
** IN-SILICO_ANNOTATION
 
** IN-SILICO_ANNOTATION
 
***EC-NUMBER
 
***EC-NUMBER
−
* [[Tiso_gene_18533]]
+
* [[Tiso_gene_800]]
−
** IN-SILICO_ANNOTATION
+
−
***AUTOMATED-NAME-MATCH
+
−
* [[Tiso_gene_15088]]
+
−
** [[pantograph]]-[[esiliculosus]]
+
−
* [[Tiso_gene_6563]]
+
 
** IN-SILICO_ANNOTATION
 
** IN-SILICO_ANNOTATION
 
***EC-NUMBER
 
***EC-NUMBER
−
* [[Tiso_gene_6562]]
+
* [[Tiso_gene_10984]]
 
** IN-SILICO_ANNOTATION
 
** IN-SILICO_ANNOTATION
 
***EC-NUMBER
 
***EC-NUMBER
−
* [[Tiso_gene_5425]]
+
* [[Tiso_gene_801]]
 
** IN-SILICO_ANNOTATION
 
** IN-SILICO_ANNOTATION
 
***EC-NUMBER
 
***EC-NUMBER
 
== Pathways  ==
 
== Pathways  ==
 +
* [[PWY-735]], jasmonic acid biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-735 PWY-735]
 +
** '''15''' reactions found over '''19''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[orthology]]:
 
−
** [[pantograph]]:
 
−
*** [[esiliculosus]]
 
 
* [[annotation]]:
 
* [[annotation]]:
 
** [[pathwaytools]]:
 
** [[pathwaytools]]:
 
*** [[in-silico_annotation]]
 
*** [[in-silico_annotation]]
 
== External links  ==
 
== External links  ==
−
* RHEA:
+
{{#set: direction=LEFT-TO-RIGHT}}
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=10160 10160]
+
{{#set: common name=acyl-coenzyme_a_thioesterase_mitochondrial-like}}
−
* LIGAND-RXN:
+
{{#set: common name=thioesterase_superfamily_member_2}}
−
** [http://www.genome.jp/dbget-bin/www_bget?R07145 R07145]
+
{{#set: common name=ORF}}
−
* UNIPROT:
+
{{#set: ec number=EC-3.1.2.20}}
−
** [http://www.uniprot.org/uniprot/Q06004 Q06004]
+
{{#set: gene associated=Tiso_gene_7477|Tiso_gene_800|Tiso_gene_10984|Tiso_gene_801}}
−
** [http://www.uniprot.org/uniprot/Q00796 Q00796]
+
{{#set: in pathway=PWY-735}}
−
** [http://www.uniprot.org/uniprot/Q57517 Q57517]
+
−
** [http://www.uniprot.org/uniprot/P77280 P77280]
+
−
** [http://www.uniprot.org/uniprot/O35045 O35045]
+
−
** [http://www.uniprot.org/uniprot/P27867 P27867]
+
−
** [http://www.uniprot.org/uniprot/Q02912 Q02912]
+
−
** [http://www.uniprot.org/uniprot/P36624 P36624]
+
−
** [http://www.uniprot.org/uniprot/P35497 P35497]
+
−
** [http://www.uniprot.org/uniprot/Q64442 Q64442]
+
−
** [http://www.uniprot.org/uniprot/Q07786 Q07786]
+
−
{{#set: direction=REVERSIBLE}}
+
−
{{#set: common name=l-iditol_2-dehydrogenase}}
+
−
{{#set: common name=polyketide_synthase}}
+
−
{{#set: ec number=EC-1.1.1.14}}
+
−
{{#set: gene associated=Tiso_gene_5424|Tiso_gene_18533|Tiso_gene_15088|Tiso_gene_6563|Tiso_gene_6562|Tiso_gene_5425}}
+
−
{{#set: in pathway=}}
+
−
{{#set: reconstruction category=orthology}}
+
−
{{#set: reconstruction tool=pantograph}}
+
−
{{#set: reconstruction source=esiliculosus}}
+
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction source=in-silico_annotation}}
 
{{#set: reconstruction source=in-silico_annotation}}

Revision as of 18:17, 10 January 2018

Reaction RXN-10708

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • acyl-coenzyme_a_thioesterase_mitochondrial-like
    • thioesterase_superfamily_member_2
    • ORF
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 H2O[c] + 1 jasmonoyl-CoA[c] => 1 (+)-7-iso-jasmonate[c] + 1 coenzyme A[c] + 1 H+[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-735, jasmonic acid biosynthesis: PWY-735
    • 15 reactions found over 19 reactions in the full pathway

Reconstruction information

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=RXN0-7239&oldid=17059"