Difference between revisions of "RXN66-472"

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(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=ADENOSYLCOBALAMIN ADENOSYLCOBALAMIN] == * smiles: ** CC%15(C=C%13(C(N%12(C%14(OC(CO)C(OP([O-])(...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-6642 RXN-6642] == * direction: ** LEFT-TO-RIGHT * common name: ** aminopeptidase_n ** membrane_...")
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[[Category:Metabolite]]
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[[Category:Reaction]]
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=ADENOSYLCOBALAMIN ADENOSYLCOBALAMIN] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-6642 RXN-6642] ==
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* smiles:
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* direction:
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** CC%15(C=C%13(C(N%12(C%14(OC(CO)C(OP([O-])(=O)OC(C)CNC(=O)CCC1(C(CC(N)=O)C2(C4(C)(C(C)(CC(N)=O)C(CCC(=O)N)C3(C(C)=C6(C(CC(=O)N)(C(CCC(N)=O)C5(C=C8(C(C)(C)C(CCC(N)=O)C7(C(C)=C1N2[Co---]([N+]=34)([N+]=56)([N+]=78)(CC9(C(C(O)C(O9)N%10(C=NC%11(C%10=NC=NC=%11N)))O))[N+](=C%12)%13))))C)))))(C))C(O)%14)))=CC(C)=%15))
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** LEFT-TO-RIGHT
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* inchi key:
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** InChIKey=ZIHHMGTYZOSFRC-YGHJOQEPSA-L
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* common name:
 
* common name:
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** adenosylcobalamin
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** aminopeptidase_n
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* molecular weight:
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** membrane_aminopeptidase_i
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** 1579.596   
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* ec number:
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** [http://enzyme.expasy.org/EC/3.4.11.2 EC-3.4.11.2]
 
* Synonym(s):
 
* Synonym(s):
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** coenzyme B12
 
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** cobamide coenzyme
 
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** deoxyadenosylcobalamin
 
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** cobamamide
 
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** vitamin B12
 
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** cobamamid
 
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** 5,6-dimethylbenzimidazolyl-5-deoxyadenosyl-cobamide
 
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** (5'-deoxy-5'-adenosyl)cobamide coenzyme
 
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** (5,6-dimethylbenzimidazolyl)cobamide coenzyme
 
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** 5'-deoxy-5'-adenosylcobalamin
 
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** 5'-deoxyadenosyl vitamin B12
 
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** 5'-deoxyadenosyl-5,6-dimethylbenzimidazolylcobamide
 
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** 5'-deoxyadenosylcobalamin
 
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** 5,6-dimethylbenzimidazolyl-Co-5'-deoxyadenosylcobamide
 
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** calomide
 
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** cobalamin coenzyme
 
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** dibencozide
 
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** funacomide
 
  
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== Reaction(s) known to consume the compound ==
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== Reaction Formula ==
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== Reaction(s) known to produce the compound ==
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* With identifiers:
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* [[RXN-8770]]
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** 1 [[WATER]][c] '''+''' 1 [[CPD-6262]][c] '''=>''' 1 [[GLY]][c] '''+''' 1 [[S-Substituted-L-Cysteines]][c]
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* [[COBALADENOSYLTRANS-RXN]]
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* With common name(s):
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== Reaction(s) of unknown directionality ==
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** 1 H2O[c] '''+''' 1 a [Cys-Gly]-S-conjugate[c] '''=>''' 1 glycine[c] '''+''' 1 an L-cysteine-S-conjugate[c]
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* [[COBALAMINSYN-RXN]]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* Gene: [[Tiso_gene_860]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: AUTOMATED-NAME-MATCH
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** Source: [[orthology-esiliculosus]]
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* Gene: [[Tiso_gene_16906]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: AUTOMATED-NAME-MATCH
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== Pathways  ==
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* [[PWY-6842]], glutathione-mediated detoxification II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6842 PWY-6842]
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** '''2''' reactions found over '''8''' reactions in the full pathway
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* [[PWY-4061]], glutathione-mediated detoxification I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-4061 PWY-4061]
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** '''2''' reactions found over '''5''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-esiliculosus]]
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*** Tool: [[pantograph]]
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* Category: [[annotation]]
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** Source: [[annotation-in-silico_annotation]]
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*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
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* CAS : 13870-90-1
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{{#set: direction=LEFT-TO-RIGHT}}
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* METABOLIGHTS : MTBLC18408
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{{#set: common name=aminopeptidase_n}}
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* PUBCHEM:
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{{#set: common name=membrane_aminopeptidase_i}}
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** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=91820207 91820207]
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{{#set: ec number=EC-3.4.11.2}}
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* HMDB : HMDB02086
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{{#set: gene associated=Tiso_gene_860|Tiso_gene_16906}}
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* LIGAND-CPD:
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{{#set: in pathway=PWY-6842|PWY-4061}}
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** [http://www.genome.jp/dbget-bin/www_bget?C00194 C00194]
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{{#set: reconstruction category=orthology|annotation}}
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* CHEBI:
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{{#set: reconstruction source=annotation-in-silico_annotation|orthology-esiliculosus}}
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** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=18408 18408]
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{{#set: reconstruction tool=pantograph|pathwaytools}}
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* BIGG : adocbl
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{{#set: smiles=CC%15(C=C%13(C(N%12(C%14(OC(CO)C(OP([O-])(=O)OC(C)CNC(=O)CCC1(C(CC(N)=O)C2(C4(C)(C(C)(CC(N)=O)C(CCC(=O)N)C3(C(C)=C6(C(CC(=O)N)(C(CCC(N)=O)C5(C=C8(C(C)(C)C(CCC(N)=O)C7(C(C)=C1N2[Co---]([N+]=34)([N+]=56)([N+]=78)(CC9(C(C(O)C(O9)N%10(C=NC%11(C%10=NC=NC=%11N)))O))[N+](=C%12)%13))))C)))))(C))C(O)%14)))=CC(C)=%15))}}
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{{#set: inchi key=InChIKey=ZIHHMGTYZOSFRC-YGHJOQEPSA-L}}
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{{#set: common name=adenosylcobalamin}}
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{{#set: molecular weight=1579.596    }}
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{{#set: common name=coenzyme B12|cobamide coenzyme|deoxyadenosylcobalamin|cobamamide|vitamin B12|cobamamid|5,6-dimethylbenzimidazolyl-5-deoxyadenosyl-cobamide|(5'-deoxy-5'-adenosyl)cobamide coenzyme|(5,6-dimethylbenzimidazolyl)cobamide coenzyme|5'-deoxy-5'-adenosylcobalamin|5'-deoxyadenosyl vitamin B12|5'-deoxyadenosyl-5,6-dimethylbenzimidazolylcobamide|5'-deoxyadenosylcobalamin|5,6-dimethylbenzimidazolyl-Co-5'-deoxyadenosylcobamide|calomide|cobalamin coenzyme|dibencozide|funacomide}}
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{{#set: produced by=RXN-8770|COBALADENOSYLTRANS-RXN}}
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{{#set: reversible reaction associated=COBALAMINSYN-RXN}}
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Revision as of 16:14, 21 March 2018

Reaction RXN-6642

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • aminopeptidase_n
    • membrane_aminopeptidase_i
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-6842, glutathione-mediated detoxification II: PWY-6842
    • 2 reactions found over 8 reactions in the full pathway
  • PWY-4061, glutathione-mediated detoxification I: PWY-4061
    • 2 reactions found over 5 reactions in the full pathway

Reconstruction information

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=RXN66-472&oldid=33037"