Difference between revisions of "RXN66-475-CPD-14717//CPD-14719/FORMYL-COA.32."

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-17878 RXN-17878] == * direction: ** LEFT-TO-RIGHT * common name: ** methionine_aminopeptidase *...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN66-475-CPD-14717//CPD-14719/FORMYL-COA.32. RXN66-475-CPD-14717//CPD-14719/FORMYL-COA.32.] == * d...")
 
(One intermediate revision by the same user not shown)
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[[Category:Reaction]]
 
[[Category:Reaction]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-17878 RXN-17878] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN66-475-CPD-14717//CPD-14719/FORMYL-COA.32. RXN66-475-CPD-14717//CPD-14719/FORMYL-COA.32.] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
−
* common name:
 
−
** methionine_aminopeptidase
 
−
* ec number:
 
−
** [http://enzyme.expasy.org/EC/3.4.11.18 EC-3.4.11.18]
 
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[L-methionyl-L-valyl-Protein]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[N-terminal-L-valine]][c] '''+''' 1 [[MET]][c]
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** 1.0 [[CPD-14717]][c] '''=>''' 1.0 [[CPD-14719]][c] '''+''' 1.0 [[FORMYL-COA]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 an N-terminal-L-methionyl-L-valyl-[protein][c] '''+''' 1 H2O[c] '''=>''' 1 an N-terminal L-valyl-[protein][c] '''+''' 1 L-methionine[c]
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** 1.0 (R)-2-hydroxy-stearoyl-CoA[c] '''=>''' 1.0 heptadecanal[c] '''+''' 1.0 formyl-CoA[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
−
Genes have been associated with this reaction based on different elements listed below.
 
−
* [[Tiso_gene_5715]]
 
−
** IN-SILICO_ANNOTATION
 
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***AUTOMATED-NAME-MATCH
 
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** EXPERIMENTAL_ANNOTATION
 
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***AUTOMATED-NAME-MATCH
 
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* [[Tiso_gene_4247]]
 
−
** IN-SILICO_ANNOTATION
 
−
***AUTOMATED-NAME-MATCH
 
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY-7800]], Ac/N-end rule pathway: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7800 PWY-7800]
 
−
** '''21''' reactions found over '''21''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* Category: [[annotation]]
+
* Category: [[gap-filling]]
−
** Source: [[annotation-experimental_annotation]]
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** Source: [[gap-filling-gapfilling_solution_with_meneco_draft_medium]]
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*** Tool: [[pathwaytools]]
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*** Tool: [[meneco]]
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** Source: [[annotation-in-silico_annotation]]
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**** Comment: [[added for gapfilling]]
−
*** Tool: [[pathwaytools]]
+
 
== External links  ==
 
== External links  ==
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=methionine_aminopeptidase}}
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{{#set: in pathway=}}
−
{{#set: ec number=EC-3.4.11.18}}
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{{#set: reconstruction category=gap-filling}}
−
{{#set: gene associated=Tiso_gene_5715|Tiso_gene_4247}}
+
{{#set: reconstruction source=gap-filling-gapfilling_solution_with_meneco_draft_medium}}
−
{{#set: in pathway=PWY-7800}}
+
{{#set: reconstruction tool=meneco}}
−
{{#set: reconstruction category=annotation}}
+
{{#set: reconstruction comment=added for gapfilling}}
−
{{#set: reconstruction source=annotation-experimental_annotation|annotation-in-silico_annotation}}
+
−
{{#set: reconstruction tool=pathwaytools}}
+

Latest revision as of 20:55, 21 March 2018

Reaction RXN66-475-CPD-14717//CPD-14719/FORMYL-COA.32.

  • direction:
    • LEFT-TO-RIGHT
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1.0 (R)-2-hydroxy-stearoyl-CoA[c] => 1.0 heptadecanal[c] + 1.0 formyl-CoA[c]

Genes associated with this reaction

Pathways

Reconstruction information

External links

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