Difference between revisions of "S-ADENMETSYN-RXN"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=4.2.1.58-RXN 4.2.1.58-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** (3R)-3-hydroxybutanoy...")
(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=SELENOHOMOCYSTEINE SELENOHOMOCYSTEINE] == * smiles: ** C(C[Se])C([N+])C(=O)[O-] * inchi key: **...")
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[[Category:Reaction]]
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[[Category:Metabolite]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=4.2.1.58-RXN 4.2.1.58-RXN] ==
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=SELENOHOMOCYSTEINE SELENOHOMOCYSTEINE] ==
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* direction:
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* smiles:
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** LEFT-TO-RIGHT
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** C(C[Se])C([N+])C(=O)[O-]
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* inchi key:
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** InChIKey=RCWCGLALNCIQNM-VKHMYHEASA-N
 
* common name:
 
* common name:
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** (3R)-3-hydroxybutanoyl-[acyl-carrier-protein] hydratase
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** seleno-L-homocysteine
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** polyketide_synthase
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* molecular weight:
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* ec number:
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** 181.073   
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** [http://enzyme.expasy.org/EC/2.3.1.86 EC-2.3.1.86]
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** [http://enzyme.expasy.org/EC/2.3.1.85 EC-2.3.1.85]
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** [http://enzyme.expasy.org/EC/4.2.1.59 EC-4.2.1.59]
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* Synonym(s):
 
* Synonym(s):
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** crotonoyl-[acyl-carrier-protein] hydratase
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** 2-amino-4-selanyl-butanoate
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** β-hydroxybutyryl acyl carrier protein (ACP) dehydrase
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** β-hydroxybutyryl acyl carrier protein dehydrase
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** enoyl acyl carrier protein hydrase
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** crotonyl acyl carrier protein hydratase
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** 3-hydroxybutyryl acyl carrier protein dehydratase
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** β-hydroxybutyryl acyl carrier  protein dehydrase
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** (3R)-3-hydroxybutanoyl-[acyl-carrier-protein] hydro-lyase (but-2-enoyl-[acyl-carrier protein]-forming)
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** (3R)-3-hydroxybutanoyl-[acyl-carrier-protein] hydro-lyase
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== Reaction Formula ==
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== Reaction(s) known to consume the compound ==
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* With identifiers:
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== Reaction(s) known to produce the compound ==
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** 1 [[Beta-3-hydroxybutyryl-ACPs]][c] '''=>''' 1 [[WATER]][c] '''+''' 1 [[Crotonyl-ACPs]][c]
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* [[RXN-12729]]
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* With common name(s):
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* [[RXN-15137]]
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** 1 a (3R)-3-hydroxybutanoyl-[acp][c] '''=>''' 1 H2O[c] '''+''' 1 a crotonyl-[acp][c]
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== Reaction(s) of unknown directionality ==
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[Tiso_gene_10876]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_136]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_500]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_13394]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_135]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_6884]]
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** EXPERIMENTAL_ANNOTATION
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***AUTOMATED-NAME-MATCH
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== Pathways  ==
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* [[PWY-5971]], palmitate biosynthesis II (bacteria and plants): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5971 PWY-5971]
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** '''31''' reactions found over '''31''' reactions in the full pathway
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* [[PWY-5994]], palmitate biosynthesis I (animals and fungi): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5994 PWY-5994]
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** '''31''' reactions found over '''31''' reactions in the full pathway
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* [[PWY-7388]], octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7388 PWY-7388]
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** '''9''' reactions found over '''9''' reactions in the full pathway
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== Reconstruction information  ==
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* [[manual]]:
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** [[primary_network]]
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* [[annotation]]:
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** [[pathwaytools]]:
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*** [[experimental_annotation]]
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*** [[in-silico_annotation]]
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== External links  ==
 
== External links  ==
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* LIGAND-RXN:
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* LIGAND-CPD:
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** [http://www.genome.jp/dbget-bin/www_bget?R04428 R04428]
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** [http://www.genome.jp/dbget-bin/www_bget?C05698 C05698]
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{{#set: direction=LEFT-TO-RIGHT}}
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* CHEBI:
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{{#set: common name=(3R)-3-hydroxybutanoyl-[acyl-carrier-protein] hydratase}}
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** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=84850 84850]
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{{#set: common name=polyketide_synthase}}
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* METABOLIGHTS : MTBLC9096
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{{#set: ec number=EC-2.3.1.86}}
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* PUBCHEM:
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{{#set: ec number=EC-2.3.1.85}}
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** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=90659042 90659042]
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{{#set: ec number=EC-4.2.1.59}}
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* HMDB : HMDB04119
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{{#set: common name=crotonoyl-[acyl-carrier-protein] hydratase|β-hydroxybutyryl acyl carrier protein (ACP) dehydrase|β-hydroxybutyryl acyl carrier protein dehydrase|enoyl acyl carrier protein hydrase|crotonyl acyl carrier protein hydratase|3-hydroxybutyryl acyl carrier protein dehydratase|β-hydroxybutyryl acyl carrier  protein dehydrase|(3R)-3-hydroxybutanoyl-[acyl-carrier-protein] hydro-lyase (but-2-enoyl-[acyl-carrier protein]-forming)|(3R)-3-hydroxybutanoyl-[acyl-carrier-protein] hydro-lyase}}
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{{#set: smiles=C(C[Se])C([N+])C(=O)[O-]}}
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{{#set: gene associated=Tiso_gene_10876|Tiso_gene_136|Tiso_gene_500|Tiso_gene_13394|Tiso_gene_135|Tiso_gene_6884}}
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{{#set: inchi key=InChIKey=RCWCGLALNCIQNM-VKHMYHEASA-N}}
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{{#set: in pathway=PWY-5971|PWY-5994|PWY-7388}}
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{{#set: common name=seleno-L-homocysteine}}
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{{#set: reconstruction category=manual}}
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{{#set: molecular weight=181.073    }}
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{{#set: reconstruction source=primary_network}}
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{{#set: common name=2-amino-4-selanyl-butanoate}}
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{{#set: reconstruction category=annotation}}
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{{#set: produced by=RXN-12729|RXN-15137}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction source=experimental_annotation|in-silico_annotation}}
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Revision as of 19:32, 18 March 2018

Metabolite SELENOHOMOCYSTEINE

  • smiles:
    • C(C[Se])C([N+])C(=O)[O-]
  • inchi key:
    • InChIKey=RCWCGLALNCIQNM-VKHMYHEASA-N
  • common name:
    • seleno-L-homocysteine
  • molecular weight:
    • 181.073
  • Synonym(s):
    • 2-amino-4-selanyl-butanoate

Reaction(s) known to consume the compound

Reaction(s) known to produce the compound

Reaction(s) of unknown directionality

External links

"C(C[Se])C([N+])C(=O)[O-" cannot be used as a page name in this wiki.



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