Semantic search

	Ec number	Reconstruction category	Reconstruction tool	Reconstruction source	Gene associated	In pathway
ACETYLGLUTKIN-RXN	EC-2.7.2.8	Orthology Annotation	Pantograph Pathwaytools	Annotation-experimental annotation Orthology-athaliana Annotation-in-silico annotation Orthology-synechocystis Orthology-esiliculosus	Tiso gene 13144	PWY-5154 GLUTORN-PWY ARGSYNBSUB-PWY
ACONITATEDEHYDR-RXN		Orthology Annotation	Pantograph Pathwaytools	Annotation-in-silico annotation Annotation-experimental annotation Orthology-synechocystis	Tiso gene 13007	FERMENTATION-PWY PWY-5913 PWY66-398 PWY-5690 REDCITCYC PWY-5392 P23-PWY P105-PWY GLYOXYLATE-BYPASS PWY-6969 PWY-6728 PWY-6549 PWY-7254 PWY-7124 PWY-5750 TCA
ACONITATEHYDR-RXN		Annotation	Pathwaytools	Annotation-experimental annotation Annotation-in-silico annotation	Tiso gene 13007	PWY-5913 PWY-6969 PWY-6549 PWY-5392 P23-PWY PWY-7124 P105-PWY GLYOXYLATE-BYPASS FERMENTATION-PWY PWY-6728 REDCITCYC PWY-7254 PWY-5690 PWY66-398 TCA
ACSERLY-RXN	EC-2.5.1.47	Orthology Manual Annotation	Pantograph Pathwaytools	Annotation-experimental annotation Orthology-esiliculosus Annotation-in-silico annotation Orthology-synechocystis Manual-primary network Orthology-creinhardtii	Tiso gene 6110 Tiso gene 12184 Tiso gene 2283 Tiso gene 819 Tiso gene 17043 Tiso gene 7852	CYSTSYN-PWY
ACYLCOASYN-RXN	EC-6.2.1.3	Orthology Annotation	Pantograph Pathwaytools	Annotation-experimental annotation Annotation-in-silico annotation Orthology-esiliculosus	Tiso gene 7855 Tiso gene 13394 Tiso gene 348 Tiso gene 500 Tiso gene 10876 Tiso gene 9394 Tiso gene 136 Tiso gene 135 Tiso gene 4191	PWY-5136 PWY-7288 FAO-PWY PWY66-391
ADENOSINE-KINASE-RXN	EC-2.7.1.20	Manual Annotation	Pathwaytools	Annotation-experimental annotation Manual-primary network Annotation-in-silico annotation	Tiso gene 12078	PWY-6619
ADENOSYLHOMOCYSTEINASE-RXN	EC-3.3.1.1	Orthology Manual Annotation	Pantograph Pathwaytools	Annotation-experimental annotation Orthology-esiliculosus Annotation-in-silico annotation Orthology-athaliana Orthology-synechocystis Manual-primary network Orthology-creinhardtii	Tiso gene 14191	METHIONINE-DEG1-PWY PWY-5041
ADENYL-KIN-RXN	EC-2.7.4.3	Orthology Manual Annotation	Pantograph Pathwaytools	Annotation-experimental annotation Orthology-esiliculosus Annotation-in-silico annotation Orthology-athaliana Orthology-synechocystis Manual-primary network Orthology-creinhardtii	Tiso gene 694 Tiso gene 5837 Tiso gene 12257 Tiso gene 4816 Tiso gene 5839 Tiso gene 19036 Tiso gene 12256 Tiso gene 8576 Tiso gene 5387 Tiso gene 5081 Tiso gene 1453 Tiso gene 14116 Tiso gene 13477 Tiso gene 5388 Tiso gene 805 Tiso gene 3353 Tiso gene 19734	PWY-7219
ADENYLOSUCCINATE-SYNTHASE-RXN	EC-6.3.4.4	Orthology Manual Annotation	Pantograph Pathwaytools	Annotation-experimental annotation Orthology-esiliculosus Annotation-in-silico annotation Orthology-synechocystis Manual-primary network Orthology-creinhardtii	Tiso gene 6453 Tiso gene 743	PWY-7219
ADPREDUCT-RXN	EC-1.17.4.1	Orthology Manual Annotation	Pantograph Pathwaytools	Annotation-experimental annotation Orthology-esiliculosus Annotation-in-silico annotation Orthology-athaliana Orthology-synechocystis Manual-primary network	Tiso gene 10617 Tiso gene 9916 Tiso gene 10138 Tiso gene 9915	PWY-7220 PWY-7227
ADPSUGPPHOSPHAT-RXN	EC-3.6.1.21	Annotation	Pathwaytools	Annotation-experimental annotation	Tiso gene 7189
AICARTRANSFORM-RXN	EC-2.1.2.3	Orthology Manual Annotation	Pantograph Pathwaytools	Annotation-in-silico annotation Manual-primary network Annotation-experimental annotation Orthology-esiliculosus	Tiso gene 18420	PWY-6123 PWY-6124
AIRS-RXN	EC-6.3.3.1	Orthology Manual Annotation	Pantograph Pathwaytools	Annotation-experimental annotation Manual-primary network Annotation-in-silico annotation Orthology-synechocystis	Tiso gene 1369	PWY-6121 PWY-6122 PWY-6277
ALANINE--GLYOXYLATE-AMINOTRANSFERASE-RXN	EC-2.6.1.44	Orthology Manual Annotation	Pantograph Pathwaytools	Annotation-experimental annotation Manual-primary network Annotation-in-silico annotation Orthology-athaliana Orthology-esiliculosus	Tiso gene 11231 Tiso gene 6134 Tiso gene 5726	GLYSYN-ALA-PWY
ALANINE--TRNA-LIGASE-RXN	EC-6.1.1.7	Orthology Annotation	Pantograph Pathwaytools	Annotation-experimental annotation Annotation-in-silico annotation Orthology-esiliculosus	Tiso gene 2298 Tiso gene 3249 Tiso gene 18609 Tiso gene 19573 Tiso gene 18607	TRNA-CHARGING-PWY
ALANINE-AMINOTRANSFERASE-RXN	EC-2.6.1.2	Orthology Manual Annotation	Pantograph Pathwaytools	Annotation-experimental annotation Orthology-athaliana Annotation-in-silico annotation Manual-primary network Orthology-esiliculosus	Tiso gene 5959 Tiso gene 10957	ALANINE-DEG3-PWY PWY-7383 PWY-7117 ALACAT2-PWY PWY-7115 ALANINE-SYN2-PWY
ALDOSE-1-EPIMERASE-RXN	EC-5.1.3.3	Orthology Annotation	Pantograph Pathwaytools	Annotation-experimental annotation Orthology-athaliana Annotation-in-silico annotation	Tiso gene 19779 Tiso gene 17734	PWY0-1466
ALDOSE1EPIM-RXN	EC-5.1.3.3	Annotation	Pathwaytools	Annotation-in-silico annotation Annotation-experimental annotation	Tiso gene 19779 Tiso gene 17734	PWY-6317 PWY66-422
ALLANTOICASE-RXN	EC-3.5.3.4	Orthology Annotation	Pantograph Pathwaytools	Annotation-in-silico annotation Annotation-experimental annotation Orthology-esiliculosus	Tiso gene 15504	PWY-5697
ALLANTOINASE-RXN	EC-3.5.2.5	Annotation	Pathwaytools	Annotation-in-silico annotation Annotation-experimental annotation		PWY-5697 PWY-5698
AMINOCYL-TRNA-HYDROLASE-RXN	EC-3.1.1.29	Orthology Annotation	Pantograph Pathwaytools	Annotation-experimental annotation Annotation-in-silico annotation Orthology-esiliculosus	Tiso gene 7443 Tiso gene 13800 Tiso gene 14300
AMPSYN-RXN	EC-4.3.2.2	Manual Annotation	Pathwaytools	Annotation-experimental annotation Manual-primary network Annotation-in-silico annotation		PWY-7219
APYRASE-RXN	EC-3.6.1.5	Orthology Annotation	Pantograph Pathwaytools	Annotation-experimental annotation Annotation-in-silico annotation Orthology-esiliculosus	Tiso gene 12899 Tiso gene 20236
ARGINASE-RXN	EC-3.5.3.1	Orthology Annotation	Pantograph Pathwaytools	Annotation-experimental annotation Orthology-athaliana Annotation-in-silico annotation Orthology-esiliculosus	Tiso gene 4415	ARGASEDEG-PWY PWY-6922 ARG-PRO-PWY ARG-GLU-PWY PWY-4984 PWY-6305 CITRULBIO-PWY
ARGININE--TRNA-LIGASE-RXN	EC-6.1.1.19	Orthology Annotation	Pantograph Pathwaytools	Annotation-experimental annotation Annotation-in-silico annotation Orthology-esiliculosus	Tiso gene 12997 Tiso gene 16360	TRNA-CHARGING-PWY
ARGSUCCINLYA-RXN	EC-4.3.2.1	Orthology Manual Annotation	Pantograph Pathwaytools	Annotation-experimental annotation Orthology-esiliculosus Annotation-in-silico annotation Orthology-athaliana Orthology-synechocystis Manual-primary network Orthology-creinhardtii	Tiso gene 2485	PWY-4984 ARGSYN-PWY PWY-5154 ARGSYNBSUB-PWY PWY-4983 PWY-7400
ARGSUCCINSYN-RXN	EC-6.3.4.5	Orthology Manual Annotation	Pantograph Pathwaytools	Annotation-experimental annotation Orthology-esiliculosus Annotation-in-silico annotation Orthology-athaliana Orthology-synechocystis Manual-primary network Orthology-creinhardtii	Tiso gene 12592	PWY-5154 ARGSYN-PWY PWY-4984 ARGSYNBSUB-PWY PWY-4983 PWY-7400
ARYLAMINE-N-ACETYLTRANSFERASE-RXN	EC-2.3.1.5	Annotation	Pathwaytools	Annotation-in-silico annotation Annotation-experimental annotation	Tiso gene 9942
ASNSYNA-RXN	EC-6.3.1.1	Orthology Annotation	Pantograph Pathwaytools	Annotation-experimental annotation Annotation-in-silico annotation Orthology-esiliculosus	Tiso gene 7495 Tiso gene 1462 Tiso gene 2973	ASPARAGINESYN-PWY
ASNSYNB-RXN	EC-6.3.5.4	Orthology Manual Annotation	Pantograph Pathwaytools	Annotation-experimental annotation Orthology-athaliana Annotation-in-silico annotation Manual-primary network Orthology-esiliculosus	Tiso gene 2973 Tiso gene 7495	ASPARAGINE-BIOSYNTHESIS
ASPAMINOTRANS-RXN	EC-2.6.1.1	Orthology Manual Annotation	Pantograph Pathwaytools	Annotation-experimental annotation Orthology-esiliculosus Annotation-in-silico annotation Orthology-athaliana Orthology-synechocystis Manual-primary network Orthology-creinhardtii	Tiso gene 17809 Tiso gene 6815 Tiso gene 17718 Tiso gene 13538 Tiso gene 12889 Tiso gene 15680	PWY-5913 MALATE-ASPARTATE-SHUTTLE-PWY PWY-7383 ASPARTATE-DEG1-PWY ASPARTATESYN-PWY PWY-7117 GLUTDEG-PWY PWY-7115 ASPARAGINE-DEG1-PWY-1
ASPARAGINE--TRNA-LIGASE-RXN	EC-6.1.1.22	Annotation	Pathwaytools	Annotation-in-silico annotation Annotation-experimental annotation	Tiso gene 6065 Tiso gene 9304 Tiso gene 13908 Tiso gene 9303 Tiso gene 9908	TRNA-CHARGING-PWY
ASPARTATE--TRNA-LIGASE-RXN	EC-6.1.1.12	Orthology Annotation	Pantograph Pathwaytools	Annotation-experimental annotation Annotation-in-silico annotation Orthology-esiliculosus	Tiso gene 7126 Tiso gene 17185 Tiso gene 13081	TRNA-CHARGING-PWY
ASPARTATE-SEMIALDEHYDE-DEHYDROGENASE-RXN	EC-1.2.1.11	Orthology Manual Annotation	Pantograph Pathwaytools	Annotation-experimental annotation Orthology-esiliculosus Annotation-in-silico annotation Orthology-athaliana Orthology-synechocystis Manual-primary network Orthology-creinhardtii	Tiso gene 18603	HOMOSERSYN-PWY PWY-7153 DAPLYSINESYN-PWY PWY-2942 PWY-2941 PWY-6559 PWY-6562 PWY-5097 P101-PWY
ASPARTATEKIN-RXN	EC-2.7.2.4	Orthology Manual Annotation	Pantograph Pathwaytools	Annotation-experimental annotation Orthology-esiliculosus Annotation-in-silico annotation Orthology-athaliana Orthology-synechocystis Manual-primary network Orthology-creinhardtii	Tiso gene 16097 Tiso gene 4345 Tiso gene 13809 Tiso gene 17057	HOMOSERSYN-PWY PWY-7153 DAPLYSINESYN-PWY PWY-2942 PWY-2941 PWY-6559 PWY-6562 PWY-5097 P101-PWY
ASPCARBTRANS-RXN	EC-2.1.3.2	Orthology Manual Annotation	Pantograph Pathwaytools	Annotation-experimental annotation Orthology-esiliculosus Annotation-in-silico annotation Orthology-athaliana Orthology-synechocystis Manual-primary network Orthology-creinhardtii	Tiso gene 13527	PWY-7790 PWY-7791 PWY-5686
ATPASE-RXN	EC-3.6.4.6 EC-3.6.1.3 EC-3.6.1.15	Orthology Annotation	Pantograph Pathwaytools	Annotation-in-silico annotation Orthology-athaliana Orthology-creinhardtii Annotation-experimental annotation	Tiso gene 79 Tiso gene 11754 Tiso gene 2450 Tiso gene 3754 Tiso gene 19350 Tiso gene 9234 Tiso gene 5825 Tiso gene 1181 Tiso gene 13738 Tiso gene 1984 Tiso gene 3580 Tiso gene 12088 Tiso gene 8601 Tiso gene 623 Tiso gene 570 Tiso gene 13211 Tiso gene 20353 Tiso gene 20581 Tiso gene 4157 Tiso gene 9423 Tiso gene 6599 Tiso gene 2924 Tiso gene 2798 Tiso gene 15351 Tiso gene 5527 Tiso gene 12148 Tiso gene 13325 Tiso gene 2452 Tiso gene 19098 Tiso gene 4693 Tiso gene 14646 Tiso gene 237 Tiso gene 17449 Tiso gene 11923 Tiso gene 16478 Tiso gene 567 Tiso gene 9541 Tiso gene 4692 Tiso gene 9659 Tiso gene 14227 Tiso gene 5005 Tiso gene 621 Tiso gene 13737 Tiso gene 18780 Tiso gene 1358 Tiso gene 1983 Tiso gene 4330 Tiso gene 4026 Tiso gene 13520 Tiso gene 7215 Tiso gene 10771 Tiso gene 12899 Tiso gene 13518 Tiso gene 1790 Tiso gene 4092 Tiso gene 2448 Tiso gene 5013 Tiso gene 1291 Tiso gene 195 Tiso gene 546 Tiso gene 4726 Tiso gene 17616 Tiso gene 1960 Tiso gene 250 Tiso gene 1360 Tiso gene 15465 Tiso gene 16915 Tiso gene 5014 Tiso gene 11155 Tiso gene 13268 Tiso gene 13409 Tiso gene 1672 Tiso gene 18443 Tiso gene 17751 Tiso gene 6592 Tiso gene 5004 Tiso gene 18105 Tiso gene 4192 Tiso gene 2897 Tiso gene 38 Tiso gene 8584 Tiso gene 11012 Tiso gene 1959 Tiso gene 14226 Tiso gene 9262 Tiso gene 8741 Tiso gene 1145 Tiso gene 6012 Tiso gene 8461 Tiso gene 7210 Tiso gene 5826 Tiso gene 1610 Tiso gene 15043 Tiso gene 873 Tiso gene 2451 Tiso gene 17675 Tiso gene 3581 Tiso gene 17201 Tiso gene 8295 Tiso gene 13681 Tiso gene 9959 Tiso gene 13521 Tiso gene 12618 Tiso gene 8950 Tiso gene 7979 Tiso gene 5166 Tiso gene 13264 Tiso gene 6820 Tiso gene 8164 Tiso gene 2206 Tiso gene 601 Tiso gene 18007 Tiso gene 10282 Tiso gene 9263 Tiso gene 10760 Tiso gene 11325 Tiso gene 2889 Tiso gene 9243 Tiso gene 8742 Tiso gene 253 Tiso gene 6838 Tiso gene 6181 Tiso gene 829 Tiso gene 15850 Tiso gene 1917 Tiso gene 14474 Tiso gene 4155 Tiso gene 10823 Tiso gene 6537 Tiso gene 4437 Tiso gene 199 Tiso gene 572 Tiso gene 1306 Tiso gene 1366 Tiso gene 10824 Tiso gene 9114 Tiso gene 7873 Tiso gene 674 Tiso gene 8860 Tiso gene 4595 Tiso gene 8949 Tiso gene 11098 Tiso gene 2447 Tiso gene 569 Tiso gene 11648 Tiso gene 6180 Tiso gene 5525 Tiso gene 10584 Tiso gene 1914 Tiso gene 12953 Tiso gene 2929 Tiso gene 8153 Tiso gene 10981 Tiso gene 5528 Tiso gene 9264 Tiso gene 6822 Tiso gene 4156 Tiso gene 7745 Tiso gene 14113 Tiso gene 9460 Tiso gene 2068 Tiso gene 13653 Tiso gene 5526 Tiso gene 1444 Tiso gene 1611 Tiso gene 1541 Tiso gene 2449 Tiso gene 12185 Tiso gene 5307 Tiso gene 6839 Tiso gene 14239 Tiso gene 14547 Tiso gene 3406 Tiso gene 11192 Tiso gene 20327 Tiso gene 538 Tiso gene 7387 Tiso gene 2631 Tiso gene 7123 Tiso gene 15988 Tiso gene 12149 Tiso gene 9926 Tiso gene 8859 Tiso gene 8763 Tiso gene 4091 Tiso gene 4436 Tiso gene 568 Tiso gene 11689 Tiso gene 5529 Tiso gene 4596 Tiso gene 10221 Tiso gene 14816 Tiso gene 1916 Tiso gene 13522 Tiso gene 9004 Tiso gene 6614
ATPSYN-RXN	EC-3.6.3.14	Orthology Manual Annotation	Pantograph Pathwaytools	Annotation-experimental annotation Manual-primary network Annotation-in-silico annotation Orthology-esiliculosus	Tiso gene 11754 Tiso gene 9460 Tiso gene 12618 Tiso gene 18105 Tiso gene 11192 Tiso gene 5307 Tiso gene 15850 Tiso gene 1366 Tiso gene 7213 Tiso gene 10981 Tiso gene 2798 Tiso gene 1365 Tiso gene 17383 Tiso gene 7215 Tiso gene 11753 Tiso gene 11155 Tiso gene 6012 Tiso gene 6592	PWY-7219
BIOTIN-CARBOXYL-RXN	EC-6.3.4.14	Annotation	Pathwaytools	Annotation-experimental annotation Annotation-in-silico annotation	Tiso gene 7965	PWY0-1264
BRANCHED-CHAINAMINOTRANSFERILEU-RXN	EC-2.6.1.42	Orthology Manual Annotation	Pantograph Pathwaytools	Annotation-experimental annotation Orthology-esiliculosus Annotation-in-silico annotation Orthology-athaliana Orthology-synechocystis Manual-primary network Orthology-creinhardtii	Tiso gene 14984 Tiso gene 17748 Tiso gene 18403	ILEUSYN-PWY ILEUDEG-PWY PWY-5108 PWY-5103 PWY-5101 PWY-5078 PWY-5104
BRANCHED-CHAINAMINOTRANSFERLEU-RXN	EC-2.6.1.6 EC-2.6.1.42	Orthology Manual Annotation	Pantograph Pathwaytools	Annotation-in-silico annotation Manual-primary network Annotation-experimental annotation Orthology-synechocystis Orthology-esiliculosus	Tiso gene 18403 Tiso gene 14984	PWY-7767 LEU-DEG2-PWY LEUSYN-PWY PWY-5076
BRANCHED-CHAINAMINOTRANSFERVAL-RXN	EC-2.6.1.42	Orthology Manual Annotation	Pantograph Pathwaytools	Annotation-experimental annotation Manual-primary network Annotation-in-silico annotation Orthology-synechocystis Orthology-esiliculosus	Tiso gene 18403 Tiso gene 14984	VALSYN-PWY VALDEG-PWY ALANINE-VALINESYN-PWY PWY-5057
CARBAMATE-KINASE-RXN	EC-2.7.2.2	Annotation	Pathwaytools	Annotation-experimental annotation		PWY0-41 CITRULLINE-DEG-PWY
CARBODEHYDRAT-RXN	EC-4.2.1.1	Orthology Annotation	Pantograph Pathwaytools	Orthology-creinhardtii Annotation-in-silico annotation Annotation-experimental annotation Orthology-esiliculosus	Tiso gene 3056 Tiso gene 19413 Tiso gene 18927 Tiso gene 6150 Tiso gene 20230 Tiso gene 7660 Tiso gene 1600 Tiso gene 19414 Tiso gene 9852 Tiso gene 17511
CARBOXYLESTERASE-RXN	EC-3.1.1.1	Orthology Annotation	Pantograph Pathwaytools	Annotation-in-silico annotation Annotation-experimental annotation Orthology-esiliculosus	Tiso gene 1538 Tiso gene 1922 Tiso gene 4606 Tiso gene 17029 Tiso gene 1537 Tiso gene 2556 Tiso gene 9429 Tiso gene 11351 Tiso gene 10066 Tiso gene 4650 Tiso gene 16518 Tiso gene 19778 Tiso gene 12686
CARBPSYN-RXN	EC-6.3.5.5	Orthology Manual Annotation	Pantograph Pathwaytools	Annotation-experimental annotation Manual-primary network Annotation-in-silico annotation Orthology-esiliculosus	Tiso gene 4976 Tiso gene 4975 Tiso gene 4685	ARGSYN-PWY PWY-5154 PWY-7790 ARGSYNBSUB-PWY PWY-7400 PWY-7791 PWY-5686
CATAL-RXN	EC-1.11.1.6 EC-1.11.1.21	Orthology Annotation	Pantograph Pathwaytools	Annotation-experimental annotation Annotation-in-silico annotation Orthology-synechocystis	Tiso gene 3006 Tiso gene 11916 Tiso gene 5435 Tiso gene 19683 Tiso gene 11607 Tiso gene 12499 Tiso gene 4990 Tiso gene 15923	PWY-5506 DETOX1-PWY DETOX1-PWY-1
CDPKIN-RXN	EC-2.7.4.6	Orthology Manual Annotation	Pantograph Pathwaytools	Annotation-experimental annotation Orthology-esiliculosus Annotation-in-silico annotation Orthology-athaliana Orthology-synechocystis Manual-primary network	Tiso gene 16529 Tiso gene 17271 Tiso gene 17272 Tiso gene 195 Tiso gene 9290 Tiso gene 18224	PWY-7205
CDPREDUCT-RXN	EC-1.17.4.1	Orthology Manual Annotation	Pantograph Pathwaytools	Annotation-experimental annotation Orthology-esiliculosus Annotation-in-silico annotation Orthology-athaliana Orthology-synechocystis Manual-primary network	Tiso gene 10617 Tiso gene 9916 Tiso gene 10138 Tiso gene 9915	PWY-7210 PWY-7198 PWY-6545 PWY0-166 PWY-7184
CHORISMATE-SYNTHASE-RXN	EC-4.2.3.5	Orthology Manual Annotation	Pantograph Pathwaytools	Annotation-experimental annotation Orthology-esiliculosus Annotation-in-silico annotation Orthology-athaliana Orthology-synechocystis Manual-primary network Orthology-creinhardtii	Tiso gene 9630	PWY-6163

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