Difference between revisions of "THRESYN-RXN"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=2.5.1.32-RXN 2.5.1.32-RXN] == * direction: ** LEFT-TO-RIGHT * Synonym(s): ** PSase ** geranylgerany...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=THRESYN-RXN THRESYN-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** ORF ** threonine_syntha...")
 
(2 intermediate revisions by the same user not shown)
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=2.5.1.32-RXN 2.5.1.32-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=THRESYN-RXN THRESYN-RXN] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 +
* common name:
 +
** ORF
 +
** threonine_synthase
 +
* ec number:
 +
** [http://enzyme.expasy.org/EC/4.2.3.1 EC-4.2.3.1]
 
* Synonym(s):
 
* Synonym(s):
−
** PSase
 
−
** geranylgeranyl-diphosphate geranylgeranyltransferase
 
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 2 [[GERANYLGERANYL-PP]][c] '''=>''' 1 [[PPI]][c] '''+''' 1 [[CPD-464]][c]
+
** 1 [[WATER]][c] '''+''' 1 [[O-PHOSPHO-L-HOMOSERINE]][c] '''=>''' 1 [[Pi]][c] '''+''' 1 [[THR]][c]
 
* With common name(s):
 
* With common name(s):
−
** 2 geranylgeranyl diphosphate[c] '''=>''' 1 diphosphate[c] '''+''' 1 prephytoene diphosphate[c]
+
** 1 H2O[c] '''+''' 1 O-phospho-L-homoserine[c] '''=>''' 1 phosphate[c] '''+''' 1 L-threonine[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Tiso_gene_15914]]
+
* Gene: [[Tiso_gene_419]]
−
** [[pantograph]]-[[synechocystis]]
+
** Source: [[annotation-in-silico_annotation]]
−
** [[pantograph]]-[[esiliculosus]]
+
*** Assignment: EC-NUMBER
 +
** Source: [[orthology-esiliculosus]]
 +
* Gene: [[Tiso_gene_12871]]
 +
** Source: [[orthology-athaliana]]
 +
** Source: [[orthology-synechocystis]]
 +
** Source: [[orthology-creinhardtii]]
 +
* Gene: [[Tiso_gene_2614]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[Tiso_gene_418]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 +
** Source: [[annotation-experimental_annotation]]
 +
*** Assignment: EC-NUMBER
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY-6287]], neurosporene biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6287 PWY-6287]
+
* [[HOMOSER-THRESYN-PWY]], L-threonine biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=HOMOSER-THRESYN-PWY HOMOSER-THRESYN-PWY]
−
** '''4''' reactions found over '''5''' reactions in the full pathway
+
** '''2''' reactions found over '''2''' reactions in the full pathway
−
* [[PWY-6475]], trans-lycopene biosynthesis II (plants): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6475 PWY-6475]
+
−
** '''5''' reactions found over '''8''' reactions in the full pathway
+
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* Category: [[orthology]]
 
* Category: [[orthology]]
 +
** Source: [[orthology-athaliana]]
 +
*** Tool: [[pantograph]]
 +
** Source: [[orthology-creinhardtii]]
 +
*** Tool: [[pantograph]]
 
** Source: [[orthology-synechocystis]]
 
** Source: [[orthology-synechocystis]]
 
*** Tool: [[pantograph]]
 
*** Tool: [[pantograph]]
 
** Source: [[orthology-esiliculosus]]
 
** Source: [[orthology-esiliculosus]]
 
*** Tool: [[pantograph]]
 
*** Tool: [[pantograph]]
 +
* Category: [[manual]]
 +
** Source: [[manual-primary_network]]
 +
* Category: [[annotation]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Tool: [[pathwaytools]]
 +
** Source: [[annotation-experimental_annotation]]
 +
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=22296 22296]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=10840 10840]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R02065 R02065]
+
** [http://www.genome.jp/dbget-bin/www_bget?R01466 R01466]
 
* UNIPROT:
 
* UNIPROT:
−
** [http://www.uniprot.org/uniprot/P53609 P53609]
+
** [http://www.uniprot.org/uniprot/P04990 P04990]
−
** [http://www.uniprot.org/uniprot/P37295 P37295]
+
** [http://www.uniprot.org/uniprot/Q9Y9K2 Q9Y9K2]
−
** [http://www.uniprot.org/uniprot/P22872 P22872]
+
** [http://www.uniprot.org/uniprot/O28953 O28953]
−
** [http://www.uniprot.org/uniprot/P53610 P53610]
+
** [http://www.uniprot.org/uniprot/P66902 P66902]
−
** [http://www.uniprot.org/uniprot/P53612 P53612]
+
** [http://www.uniprot.org/uniprot/O59293 O59293]
−
** [http://www.uniprot.org/uniprot/P17056 P17056]
+
** [http://www.uniprot.org/uniprot/O66864 O66864]
−
** [http://www.uniprot.org/uniprot/P49293 P49293]
+
** [http://www.uniprot.org/uniprot/Q9PPA8 Q9PPA8]
 +
** [http://www.uniprot.org/uniprot/O58587 O58587]
 +
** [http://www.uniprot.org/uniprot/Q9V0P1 Q9V0P1]
 +
** [http://www.uniprot.org/uniprot/Q9V190 Q9V190]
 +
** [http://www.uniprot.org/uniprot/O26354 O26354]
 +
** [http://www.uniprot.org/uniprot/O29700 O29700]
 +
** [http://www.uniprot.org/uniprot/Q9WZ16 Q9WZ16]
 +
** [http://www.uniprot.org/uniprot/Q9UZV8 Q9UZV8]
 +
** [http://www.uniprot.org/uniprot/Q9JU91 Q9JU91]
 +
** [http://www.uniprot.org/uniprot/Q9CDV8 Q9CDV8]
 +
** [http://www.uniprot.org/uniprot/P44503 P44503]
 +
** [http://www.uniprot.org/uniprot/Q58860 Q58860]
 +
** [http://www.uniprot.org/uniprot/O66740 O66740]
 +
** [http://www.uniprot.org/uniprot/O50114 O50114]
 +
** [http://www.uniprot.org/uniprot/Q9YBW2 Q9YBW2]
 +
** [http://www.uniprot.org/uniprot/P23669 P23669]
 +
** [http://www.uniprot.org/uniprot/P27735 P27735]
 +
** [http://www.uniprot.org/uniprot/Q00063 Q00063]
 +
** [http://www.uniprot.org/uniprot/P74193 P74193]
 +
** [http://www.uniprot.org/uniprot/P73711 P73711]
 +
** [http://www.uniprot.org/uniprot/P16120 P16120]
 +
** [http://www.uniprot.org/uniprot/P00934 P00934]
 +
** [http://www.uniprot.org/uniprot/P29363 P29363]
 +
** [http://www.uniprot.org/uniprot/Q9S7B5 Q9S7B5]
 +
** [http://www.uniprot.org/uniprot/P45837 P45837]
 +
** [http://www.uniprot.org/uniprot/Q42598 Q42598]
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=PSase|geranylgeranyl-diphosphate geranylgeranyltransferase}}
+
{{#set: common name=ORF}}
−
{{#set: gene associated=Tiso_gene_15914}}
+
{{#set: common name=threonine_synthase}}
−
{{#set: in pathway=PWY-6287|PWY-6475}}
+
{{#set: ec number=EC-4.2.3.1}}
−
{{#set: reconstruction category=orthology}}
+
{{#set: gene associated=Tiso_gene_419|Tiso_gene_12871|Tiso_gene_2614|Tiso_gene_418}}
−
{{#set: reconstruction source=orthology-synechocystis|orthology-esiliculosus}}
+
{{#set: in pathway=HOMOSER-THRESYN-PWY}}
−
{{#set: reconstruction tool=pantograph}}
+
{{#set: reconstruction category=orthology|manual|annotation}}
 +
{{#set: reconstruction source=annotation-experimental_annotation|orthology-esiliculosus|annotation-in-silico_annotation|orthology-athaliana|orthology-synechocystis|manual-primary_network|orthology-creinhardtii}}
 +
{{#set: reconstruction tool=pantograph|pathwaytools}}

Latest revision as of 20:56, 21 March 2018

Reaction THRESYN-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • ORF
    • threonine_synthase
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 H2O[c] + 1 O-phospho-L-homoserine[c] => 1 phosphate[c] + 1 L-threonine[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links





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