Difference between revisions of "TRNA-CHARGING-PWY"

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(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=Pyruvate-dehydrogenase-dihydrolipoate Pyruvate-dehydrogenase-dihydrolipoate] == * common name:...")
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=TRNA-CHARGING-PWY TRNA-CHARGING-PWY] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?obje...")
 
(One intermediate revision by the same user not shown)
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[[Category:Metabolite]]
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[[Category:Pathway]]
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=Pyruvate-dehydrogenase-dihydrolipoate Pyruvate-dehydrogenase-dihydrolipoate] ==
+
== Pathway [http://metacyc.org/META/NEW-IMAGE?object=TRNA-CHARGING-PWY TRNA-CHARGING-PWY] ==
 +
* taxonomic range:
 +
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2759 TAX-2759]
 +
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2157 TAX-2157]
 
* common name:
 
* common name:
−
** a [pyruvate dehydrogenase E2 protein] N6-dihydrolipoyl-L-lysine
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** tRNA charging
 
* Synonym(s):
 
* Synonym(s):
  
−
== Reaction(s) known to consume the compound ==
+
== Reaction(s) found ==
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* [[RXN0-1133]]
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'''21''' reactions found over '''21''' reactions in the full pathway
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* [[RXN0-1132]]
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* [[ALANINE--TRNA-LIGASE-RXN]]
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== Reaction(s) known to produce the compound ==
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** 5 associated gene(s):
−
== Reaction(s) of unknown directionality ==
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*** [[Tiso_gene_2298]]
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*** [[Tiso_gene_3249]]
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*** [[Tiso_gene_18607]]
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*** [[Tiso_gene_18609]]
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*** [[Tiso_gene_19573]]
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** 3 reconstruction source(s) associated:
 +
*** [[annotation-in-silico_annotation]]
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*** [[annotation-experimental_annotation]]
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*** [[orthology-esiliculosus]]
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* [[ARGININE--TRNA-LIGASE-RXN]]
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** 2 associated gene(s):
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*** [[Tiso_gene_12997]]
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*** [[Tiso_gene_16360]]
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** 3 reconstruction source(s) associated:
 +
*** [[annotation-in-silico_annotation]]
 +
*** [[annotation-experimental_annotation]]
 +
*** [[orthology-esiliculosus]]
 +
* [[ASPARAGINE--TRNA-LIGASE-RXN]]
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** 5 associated gene(s):
 +
*** [[Tiso_gene_9304]]
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*** [[Tiso_gene_9908]]
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*** [[Tiso_gene_13908]]
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*** [[Tiso_gene_6065]]
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*** [[Tiso_gene_9303]]
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** 2 reconstruction source(s) associated:
 +
*** [[annotation-in-silico_annotation]]
 +
*** [[annotation-experimental_annotation]]
 +
* [[ASPARTATE--TRNA-LIGASE-RXN]]
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** 3 associated gene(s):
 +
*** [[Tiso_gene_13081]]
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*** [[Tiso_gene_17185]]
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*** [[Tiso_gene_7126]]
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** 3 reconstruction source(s) associated:
 +
*** [[annotation-in-silico_annotation]]
 +
*** [[annotation-experimental_annotation]]
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*** [[orthology-esiliculosus]]
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* [[CYSTEINE--TRNA-LIGASE-RXN]]
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** 2 associated gene(s):
 +
*** [[Tiso_gene_10881]]
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*** [[Tiso_gene_17657]]
 +
** 3 reconstruction source(s) associated:
 +
*** [[annotation-in-silico_annotation]]
 +
*** [[annotation-experimental_annotation]]
 +
*** [[orthology-esiliculosus]]
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* [[GLURS-RXN]]
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** 2 associated gene(s):
 +
*** [[Tiso_gene_5379]]
 +
*** [[Tiso_gene_5046]]
 +
** 4 reconstruction source(s) associated:
 +
*** [[annotation-experimental_annotation]]
 +
*** [[manual-primary_network]]
 +
*** [[annotation-in-silico_annotation]]
 +
*** [[orthology-esiliculosus]]
 +
* [[GLUTAMINE--TRNA-LIGASE-RXN]]
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** 3 associated gene(s):
 +
*** [[Tiso_gene_5915]]
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*** [[Tiso_gene_11124]]
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*** [[Tiso_gene_7596]]
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** 3 reconstruction source(s) associated:
 +
*** [[annotation-experimental_annotation]]
 +
*** [[annotation-in-silico_annotation]]
 +
*** [[orthology-esiliculosus]]
 +
* [[GLYCINE--TRNA-LIGASE-RXN]]
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** 3 associated gene(s):
 +
*** [[Tiso_gene_3788]]
 +
*** [[Tiso_gene_14742]]
 +
*** [[Tiso_gene_14743]]
 +
** 3 reconstruction source(s) associated:
 +
*** [[annotation-experimental_annotation]]
 +
*** [[annotation-in-silico_annotation]]
 +
*** [[orthology-esiliculosus]]
 +
* [[HISTIDINE--TRNA-LIGASE-RXN]]
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** 3 associated gene(s):
 +
*** [[Tiso_gene_12634]]
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*** [[Tiso_gene_8798]]
 +
*** [[Tiso_gene_13414]]
 +
** 3 reconstruction source(s) associated:
 +
*** [[annotation-experimental_annotation]]
 +
*** [[annotation-in-silico_annotation]]
 +
*** [[orthology-esiliculosus]]
 +
* [[ISOLEUCINE--TRNA-LIGASE-RXN]]
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** 2 associated gene(s):
 +
*** [[Tiso_gene_12496]]
 +
*** [[Tiso_gene_11779]]
 +
** 3 reconstruction source(s) associated:
 +
*** [[annotation-in-silico_annotation]]
 +
*** [[annotation-experimental_annotation]]
 +
*** [[orthology-esiliculosus]]
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* [[LEUCINE--TRNA-LIGASE-RXN]]
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** 2 associated gene(s):
 +
*** [[Tiso_gene_11524]]
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*** [[Tiso_gene_15439]]
 +
** 3 reconstruction source(s) associated:
 +
*** [[annotation-in-silico_annotation]]
 +
*** [[annotation-experimental_annotation]]
 +
*** [[orthology-esiliculosus]]
 +
* [[LYSINE--TRNA-LIGASE-RXN]]
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** 2 associated gene(s):
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*** [[Tiso_gene_6705]]
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*** [[Tiso_gene_16635]]
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** 3 reconstruction source(s) associated:
 +
*** [[annotation-experimental_annotation]]
 +
*** [[annotation-in-silico_annotation]]
 +
*** [[orthology-esiliculosus]]
 +
* [[METHIONINE--TRNA-LIGASE-RXN]]
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** 2 associated gene(s):
 +
*** [[Tiso_gene_284]]
 +
*** [[Tiso_gene_406]]
 +
** 3 reconstruction source(s) associated:
 +
*** [[annotation-in-silico_annotation]]
 +
*** [[annotation-experimental_annotation]]
 +
*** [[orthology-esiliculosus]]
 +
* [[PHENYLALANINE--TRNA-LIGASE-RXN]]
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** 4 associated gene(s):
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*** [[Tiso_gene_16467]]
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*** [[Tiso_gene_16650]]
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*** [[Tiso_gene_1625]]
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*** [[Tiso_gene_4232]]
 +
** 3 reconstruction source(s) associated:
 +
*** [[annotation-in-silico_annotation]]
 +
*** [[annotation-experimental_annotation]]
 +
*** [[orthology-esiliculosus]]
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* [[PROLINE--TRNA-LIGASE-RXN]]
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** 2 associated gene(s):
 +
*** [[Tiso_gene_11974]]
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*** [[Tiso_gene_14791]]
 +
** 3 reconstruction source(s) associated:
 +
*** [[annotation-in-silico_annotation]]
 +
*** [[annotation-experimental_annotation]]
 +
*** [[orthology-esiliculosus]]
 +
* [[RXN-16165]]
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** 2 associated gene(s):
 +
*** [[Tiso_gene_284]]
 +
*** [[Tiso_gene_406]]
 +
** 2 reconstruction source(s) associated:
 +
*** [[annotation-experimental_annotation]]
 +
*** [[annotation-in-silico_annotation]]
 +
* [[SERINE--TRNA-LIGASE-RXN]]
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** 4 associated gene(s):
 +
*** [[Tiso_gene_1682]]
 +
*** [[Tiso_gene_10015]]
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*** [[Tiso_gene_587]]
 +
*** [[Tiso_gene_1684]]
 +
** 3 reconstruction source(s) associated:
 +
*** [[annotation-experimental_annotation]]
 +
*** [[annotation-in-silico_annotation]]
 +
*** [[orthology-esiliculosus]]
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* [[THREONINE--TRNA-LIGASE-RXN]]
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** 2 associated gene(s):
 +
*** [[Tiso_gene_13142]]
 +
*** [[Tiso_gene_4406]]
 +
** 3 reconstruction source(s) associated:
 +
*** [[annotation-experimental_annotation]]
 +
*** [[annotation-in-silico_annotation]]
 +
*** [[orthology-esiliculosus]]
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* [[TRYPTOPHAN--TRNA-LIGASE-RXN]]
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** 3 associated gene(s):
 +
*** [[Tiso_gene_14318]]
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*** [[Tiso_gene_12988]]
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*** [[Tiso_gene_14319]]
 +
** 3 reconstruction source(s) associated:
 +
*** [[annotation-experimental_annotation]]
 +
*** [[annotation-in-silico_annotation]]
 +
*** [[orthology-esiliculosus]]
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* [[TYROSINE--TRNA-LIGASE-RXN]]
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** 4 associated gene(s):
 +
*** [[Tiso_gene_10378]]
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*** [[Tiso_gene_4174]]
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*** [[Tiso_gene_12171]]
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*** [[Tiso_gene_4175]]
 +
** 3 reconstruction source(s) associated:
 +
*** [[annotation-in-silico_annotation]]
 +
*** [[annotation-experimental_annotation]]
 +
*** [[orthology-esiliculosus]]
 +
* [[VALINE--TRNA-LIGASE-RXN]]
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** 2 associated gene(s):
 +
*** [[Tiso_gene_1372]]
 +
*** [[Tiso_gene_8041]]
 +
** 3 reconstruction source(s) associated:
 +
*** [[annotation-in-silico_annotation]]
 +
*** [[annotation-experimental_annotation]]
 +
*** [[orthology-esiliculosus]]
 +
== Reaction(s) not found ==
 
== External links  ==
 
== External links  ==
−
{{#set: common name=a [pyruvate dehydrogenase E2 protein] N6-dihydrolipoyl-L-lysine}}
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* ECOCYC:
−
{{#set: consumed by=RXN0-1133|RXN0-1132}}
+
** [http://metacyc.org/ECOLI/NEW-IMAGE?object=TRNA-CHARGING-PWY TRNA-CHARGING-PWY]
 +
{{#set: taxonomic range=TAX-2759}}
 +
{{#set: taxonomic range=TAX-2}}
 +
{{#set: taxonomic range=TAX-2157}}
 +
{{#set: common name=tRNA charging}}
 +
{{#set: reaction found=21}}
 +
{{#set: total reaction=21}}
 +
{{#set: completion rate=100.0}}

Latest revision as of 20:06, 21 March 2018

Pathway TRNA-CHARGING-PWY

Reaction(s) found

21 reactions found over 21 reactions in the full pathway

Reaction(s) not found

External links




Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=TRNA-CHARGING-PWY&oldid=39521"