Difference between revisions of "TRNA-CHARGING-PWY"

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(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-9869 CPD-9869] == * smiles: ** CC(=CCCC(=CCCC(=CCCC(=CCCC(=CCCC(=CCCC(=CCCC(=CCCC(=CCCC(=CC...")
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=TRNA-CHARGING-PWY TRNA-CHARGING-PWY] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?obje...")
 
(2 intermediate revisions by the same user not shown)
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[[Category:Metabolite]]
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[[Category:Pathway]]
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-9869 CPD-9869] ==
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=TRNA-CHARGING-PWY TRNA-CHARGING-PWY] ==
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* smiles:
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* taxonomic range:
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** CC(=CCCC(=CCCC(=CCCC(=CCCC(=CCCC(=CCCC(=CCCC(=CCCC(=CCCC(=CCC1(C(=C(OC)C=C(C=1)O)O))C)C)C)C)C)C)C)C)C)C
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2759 TAX-2759]
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* inchi key:
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2]
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** InChIKey=LIOKNOIJMJKVCG-RDSVHMIISA-N
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2157 TAX-2157]
 
* common name:
 
* common name:
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** 2-methoxy-6-all trans-decaprenyl-2-methoxy-1,4-benzoquinol
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** tRNA charging
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* molecular weight:
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−
** 821.32   
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* Synonym(s):
 
* Synonym(s):
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** 2-methoxy-6-decaprenyl-2-methoxy-1,4-benzoquinol
 
  
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== Reaction(s) known to consume the compound ==
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== Reaction(s) found ==
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* [[RXN-9235]]
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'''21''' reactions found over '''21''' reactions in the full pathway
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== Reaction(s) known to produce the compound ==
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* [[ALANINE--TRNA-LIGASE-RXN]]
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== Reaction(s) of unknown directionality ==
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** 5 associated gene(s):
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*** [[Tiso_gene_2298]]
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*** [[Tiso_gene_3249]]
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*** [[Tiso_gene_18607]]
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*** [[Tiso_gene_18609]]
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*** [[Tiso_gene_19573]]
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** 3 reconstruction source(s) associated:
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*** [[annotation-in-silico_annotation]]
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*** [[annotation-experimental_annotation]]
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*** [[orthology-esiliculosus]]
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* [[ARGININE--TRNA-LIGASE-RXN]]
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** 2 associated gene(s):
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*** [[Tiso_gene_12997]]
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*** [[Tiso_gene_16360]]
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** 3 reconstruction source(s) associated:
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*** [[annotation-in-silico_annotation]]
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*** [[annotation-experimental_annotation]]
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*** [[orthology-esiliculosus]]
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* [[ASPARAGINE--TRNA-LIGASE-RXN]]
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** 5 associated gene(s):
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*** [[Tiso_gene_9304]]
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*** [[Tiso_gene_9908]]
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*** [[Tiso_gene_13908]]
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*** [[Tiso_gene_6065]]
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*** [[Tiso_gene_9303]]
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** 2 reconstruction source(s) associated:
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*** [[annotation-in-silico_annotation]]
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*** [[annotation-experimental_annotation]]
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* [[ASPARTATE--TRNA-LIGASE-RXN]]
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** 3 associated gene(s):
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*** [[Tiso_gene_13081]]
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*** [[Tiso_gene_17185]]
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*** [[Tiso_gene_7126]]
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** 3 reconstruction source(s) associated:
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*** [[annotation-in-silico_annotation]]
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*** [[annotation-experimental_annotation]]
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*** [[orthology-esiliculosus]]
 +
* [[CYSTEINE--TRNA-LIGASE-RXN]]
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** 2 associated gene(s):
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*** [[Tiso_gene_10881]]
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*** [[Tiso_gene_17657]]
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** 3 reconstruction source(s) associated:
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*** [[annotation-in-silico_annotation]]
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*** [[annotation-experimental_annotation]]
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*** [[orthology-esiliculosus]]
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* [[GLURS-RXN]]
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** 2 associated gene(s):
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*** [[Tiso_gene_5379]]
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*** [[Tiso_gene_5046]]
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** 4 reconstruction source(s) associated:
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*** [[annotation-experimental_annotation]]
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*** [[manual-primary_network]]
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*** [[annotation-in-silico_annotation]]
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*** [[orthology-esiliculosus]]
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* [[GLUTAMINE--TRNA-LIGASE-RXN]]
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** 3 associated gene(s):
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*** [[Tiso_gene_5915]]
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*** [[Tiso_gene_11124]]
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*** [[Tiso_gene_7596]]
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** 3 reconstruction source(s) associated:
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*** [[annotation-experimental_annotation]]
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*** [[annotation-in-silico_annotation]]
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*** [[orthology-esiliculosus]]
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* [[GLYCINE--TRNA-LIGASE-RXN]]
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** 3 associated gene(s):
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*** [[Tiso_gene_3788]]
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*** [[Tiso_gene_14742]]
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*** [[Tiso_gene_14743]]
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** 3 reconstruction source(s) associated:
 +
*** [[annotation-experimental_annotation]]
 +
*** [[annotation-in-silico_annotation]]
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*** [[orthology-esiliculosus]]
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* [[HISTIDINE--TRNA-LIGASE-RXN]]
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** 3 associated gene(s):
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*** [[Tiso_gene_12634]]
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*** [[Tiso_gene_8798]]
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*** [[Tiso_gene_13414]]
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** 3 reconstruction source(s) associated:
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*** [[annotation-experimental_annotation]]
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*** [[annotation-in-silico_annotation]]
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*** [[orthology-esiliculosus]]
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* [[ISOLEUCINE--TRNA-LIGASE-RXN]]
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** 2 associated gene(s):
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*** [[Tiso_gene_12496]]
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*** [[Tiso_gene_11779]]
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** 3 reconstruction source(s) associated:
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*** [[annotation-in-silico_annotation]]
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*** [[annotation-experimental_annotation]]
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*** [[orthology-esiliculosus]]
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* [[LEUCINE--TRNA-LIGASE-RXN]]
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** 2 associated gene(s):
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*** [[Tiso_gene_11524]]
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*** [[Tiso_gene_15439]]
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** 3 reconstruction source(s) associated:
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*** [[annotation-in-silico_annotation]]
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*** [[annotation-experimental_annotation]]
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*** [[orthology-esiliculosus]]
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* [[LYSINE--TRNA-LIGASE-RXN]]
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** 2 associated gene(s):
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*** [[Tiso_gene_6705]]
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*** [[Tiso_gene_16635]]
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** 3 reconstruction source(s) associated:
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*** [[annotation-experimental_annotation]]
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*** [[annotation-in-silico_annotation]]
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*** [[orthology-esiliculosus]]
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* [[METHIONINE--TRNA-LIGASE-RXN]]
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** 2 associated gene(s):
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*** [[Tiso_gene_284]]
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*** [[Tiso_gene_406]]
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** 3 reconstruction source(s) associated:
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*** [[annotation-in-silico_annotation]]
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*** [[annotation-experimental_annotation]]
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*** [[orthology-esiliculosus]]
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* [[PHENYLALANINE--TRNA-LIGASE-RXN]]
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** 4 associated gene(s):
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*** [[Tiso_gene_16467]]
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*** [[Tiso_gene_16650]]
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*** [[Tiso_gene_1625]]
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*** [[Tiso_gene_4232]]
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** 3 reconstruction source(s) associated:
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*** [[annotation-in-silico_annotation]]
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*** [[annotation-experimental_annotation]]
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*** [[orthology-esiliculosus]]
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* [[PROLINE--TRNA-LIGASE-RXN]]
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** 2 associated gene(s):
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*** [[Tiso_gene_11974]]
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*** [[Tiso_gene_14791]]
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** 3 reconstruction source(s) associated:
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*** [[annotation-in-silico_annotation]]
 +
*** [[annotation-experimental_annotation]]
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*** [[orthology-esiliculosus]]
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* [[RXN-16165]]
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** 2 associated gene(s):
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*** [[Tiso_gene_284]]
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*** [[Tiso_gene_406]]
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** 2 reconstruction source(s) associated:
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*** [[annotation-experimental_annotation]]
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*** [[annotation-in-silico_annotation]]
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* [[SERINE--TRNA-LIGASE-RXN]]
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** 4 associated gene(s):
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*** [[Tiso_gene_1682]]
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*** [[Tiso_gene_10015]]
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*** [[Tiso_gene_587]]
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*** [[Tiso_gene_1684]]
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** 3 reconstruction source(s) associated:
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*** [[annotation-experimental_annotation]]
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*** [[annotation-in-silico_annotation]]
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*** [[orthology-esiliculosus]]
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* [[THREONINE--TRNA-LIGASE-RXN]]
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** 2 associated gene(s):
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*** [[Tiso_gene_13142]]
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*** [[Tiso_gene_4406]]
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** 3 reconstruction source(s) associated:
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*** [[annotation-experimental_annotation]]
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*** [[annotation-in-silico_annotation]]
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*** [[orthology-esiliculosus]]
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* [[TRYPTOPHAN--TRNA-LIGASE-RXN]]
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** 3 associated gene(s):
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*** [[Tiso_gene_14318]]
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*** [[Tiso_gene_12988]]
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*** [[Tiso_gene_14319]]
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** 3 reconstruction source(s) associated:
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*** [[annotation-experimental_annotation]]
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*** [[annotation-in-silico_annotation]]
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*** [[orthology-esiliculosus]]
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* [[TYROSINE--TRNA-LIGASE-RXN]]
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** 4 associated gene(s):
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*** [[Tiso_gene_10378]]
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*** [[Tiso_gene_4174]]
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*** [[Tiso_gene_12171]]
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*** [[Tiso_gene_4175]]
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** 3 reconstruction source(s) associated:
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*** [[annotation-in-silico_annotation]]
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*** [[annotation-experimental_annotation]]
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*** [[orthology-esiliculosus]]
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* [[VALINE--TRNA-LIGASE-RXN]]
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** 2 associated gene(s):
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*** [[Tiso_gene_1372]]
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*** [[Tiso_gene_8041]]
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** 3 reconstruction source(s) associated:
 +
*** [[annotation-in-silico_annotation]]
 +
*** [[annotation-experimental_annotation]]
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*** [[orthology-esiliculosus]]
 +
== Reaction(s) not found ==
 
== External links  ==
 
== External links  ==
−
* PUBCHEM:
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* ECOCYC:
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** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=50986248 50986248]
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** [http://metacyc.org/ECOLI/NEW-IMAGE?object=TRNA-CHARGING-PWY TRNA-CHARGING-PWY]
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* CHEBI:
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{{#set: taxonomic range=TAX-2759}}
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** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=64180 64180]
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{{#set: taxonomic range=TAX-2}}
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{{#set: smiles=CC(=CCCC(=CCCC(=CCCC(=CCCC(=CCCC(=CCCC(=CCCC(=CCCC(=CCCC(=CCC1(C(=C(OC)C=C(C=1)O)O))C)C)C)C)C)C)C)C)C)C}}
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{{#set: taxonomic range=TAX-2157}}
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{{#set: inchi key=InChIKey=LIOKNOIJMJKVCG-RDSVHMIISA-N}}
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{{#set: common name=tRNA charging}}
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{{#set: common name=2-methoxy-6-all trans-decaprenyl-2-methoxy-1,4-benzoquinol}}
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{{#set: reaction found=21}}
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{{#set: molecular weight=821.32    }}
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{{#set: total reaction=21}}
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{{#set: common name=2-methoxy-6-decaprenyl-2-methoxy-1,4-benzoquinol}}
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{{#set: completion rate=100.0}}
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{{#set: consumed by=RXN-9235}}
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Latest revision as of 20:06, 21 March 2018

Pathway TRNA-CHARGING-PWY

Reaction(s) found

21 reactions found over 21 reactions in the full pathway

Reaction(s) not found

External links




Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=TRNA-CHARGING-PWY&oldid=39521"