Difference between revisions of "TRNA-Sec"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-12693 RXN-12693] == * direction: ** LEFT-TO-RIGHT * common name: ** 3-beta_hydroxysteroid_dehyd...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-8899 RXN-8899] == * direction: ** LEFT-TO-RIGHT * Synonym(s): == Reaction Formula == * With id...")
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-12693 RXN-12693] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-8899 RXN-8899] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
−
* common name:
 
−
** 3-beta_hydroxysteroid_dehydrogenase_isomerase
 
−
** ORF
 
−
* ec number:
 
−
** [http://enzyme.expasy.org/EC/1.1.1.145 EC-1.1.1.145]
 
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[CHOLESTEROL]][c] '''+''' 1 [[NAD]][c] '''=>''' 1 [[PROTON]][c] '''+''' 1 [[NADH]][c] '''+''' 1 [[CPD-13684]][c]
+
** 1 [[PROTON]][c] '''+''' 1 [[2-AMINOACRYLATE]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[PYRUVATE]][c] '''+''' 1 [[AMMONIUM]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 cholesterol[c] '''+''' 1 NAD+[c] '''=>''' 1 H+[c] '''+''' 1 NADH[c] '''+''' 1 cholest-5-en-3-one[c]
+
** 1 H+[c] '''+''' 1 2-aminoprop-2-enoate[c] '''+''' 1 H2O[c] '''=>''' 1 pyruvate[c] '''+''' 1 ammonium[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
−
Genes have been associated with this reaction based on different elements listed below.
 
−
* [[Tiso_gene_11016]]
 
−
** IN-SILICO_ANNOTATION
 
−
***EC-NUMBER
 
−
* [[Tiso_gene_2957]]
 
−
** IN-SILICO_ANNOTATION
 
−
***EC-NUMBER
 
−
* [[Tiso_gene_897]]
 
−
** IN-SILICO_ANNOTATION
 
−
***EC-NUMBER
 
−
** [[pantograph]]-[[esiliculosus]]
 
−
* [[Tiso_gene_18774]]
 
−
** IN-SILICO_ANNOTATION
 
−
***EC-NUMBER
 
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY-6946]], cholesterol degradation to androstenedione II (cholesterol dehydrogenase): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6946 PWY-6946]
+
* [[PWY-7614]], methiin metabolism: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7614 PWY-7614]
−
** '''3''' reactions found over '''22''' reactions in the full pathway
+
** '''1''' reactions found over '''7''' reactions in the full pathway
 +
* [[PWY-5707]], propanethial S-oxide biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5707 PWY-5707]
 +
** '''1''' reactions found over '''9''' reactions in the full pathway
 +
* [[PWY-5706]], alliin metabolism: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5706 PWY-5706]
 +
** '''1''' reactions found over '''11''' reactions in the full pathway
 +
* [[PWY-5708]], ethiin metabolism: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5708 PWY-5708]
 +
** '''1''' reactions found over '''5''' reactions in the full pathway
 +
* [[PWY-6539]], (Z)-phenylmethanethial S-oxide biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6539 PWY-6539]
 +
** '''1''' reactions found over '''4''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* Category: [[orthology]]
 
−
** Source: [[orthology-esiliculosus]]
 
−
*** Tool: [[pantograph]]
 
 
* Category: [[annotation]]
 
* Category: [[annotation]]
 
** Source: [[annotation-in-silico_annotation]]
 
** Source: [[annotation-in-silico_annotation]]
 +
*** Tool: [[pathwaytools]]
 +
** Source: [[annotation-experimental_annotation]]
 
*** Tool: [[pathwaytools]]
 
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
 +
* LIGAND-RXN:
 +
** [http://www.genome.jp/dbget-bin/www_bget?R08698 R08698]
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=3-beta_hydroxysteroid_dehydrogenase_isomerase}}
+
{{#set: in pathway=PWY-7614|PWY-5707|PWY-5706|PWY-5708|PWY-6539}}
−
{{#set: common name=ORF}}
+
{{#set: reconstruction category=annotation}}
−
{{#set: ec number=EC-1.1.1.145}}
+
{{#set: reconstruction source=annotation-in-silico_annotation|annotation-experimental_annotation}}
−
{{#set: gene associated=Tiso_gene_11016|Tiso_gene_2957|Tiso_gene_897|Tiso_gene_18774}}
+
{{#set: reconstruction tool=pathwaytools}}
−
{{#set: in pathway=PWY-6946}}
+
−
{{#set: reconstruction category=orthology|annotation}}
+
−
{{#set: reconstruction source=annotation-in-silico_annotation|orthology-esiliculosus}}
+
−
{{#set: reconstruction tool=pantograph|pathwaytools}}
+

Revision as of 16:31, 21 March 2018

Reaction RXN-8899

  • direction:
    • LEFT-TO-RIGHT
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Pathways

  • PWY-7614, methiin metabolism: PWY-7614
    • 1 reactions found over 7 reactions in the full pathway
  • PWY-5707, propanethial S-oxide biosynthesis: PWY-5707
    • 1 reactions found over 9 reactions in the full pathway
  • PWY-5706, alliin metabolism: PWY-5706
    • 1 reactions found over 11 reactions in the full pathway
  • PWY-5708, ethiin metabolism: PWY-5708
    • 1 reactions found over 5 reactions in the full pathway
  • PWY-6539, (Z)-phenylmethanethial S-oxide biosynthesis: PWY-6539
    • 1 reactions found over 4 reactions in the full pathway

Reconstruction information

External links



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