Difference between revisions of "TRNAs-containing-epoxy-quenosine"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=2.4.1.223-RXN 2.4.1.223-RXN] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy...")
(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=tRNAs-containing-epoxy-quenosine tRNAs-containing-epoxy-quenosine] == * common name: ** an epox...")
 
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[[Category:Reaction]]
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[[Category:Metabolite]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=2.4.1.223-RXN 2.4.1.223-RXN] ==
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=tRNAs-containing-epoxy-quenosine tRNAs-containing-epoxy-quenosine] ==
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* direction:
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* common name:
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** LEFT-TO-RIGHT
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** an epoxyqueuosine34 in tRNA
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* ec number:
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** [http://enzyme.expasy.org/EC/2.4.1.223 EC-2.4.1.223]
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* Synonym(s):
 
* Synonym(s):
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** an epoxyqueuosine at position 34 of a tRNA containing GUN anticodon
  
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== Reaction Formula ==
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== Reaction(s) known to consume the compound ==
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* With identifiers:
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== Reaction(s) known to produce the compound ==
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** 1 [[GlcA-Gal-Gal-Xyl-Proteins]][c] '''+''' 1 [[UDP-N-ACETYL-D-GLUCOSAMINE]][c] '''=>''' 1 [[PROTON]][c] '''+''' 1 [[GlcNAc-GlcA-Gal-Gal-Xyl-Protein]][c] '''+''' 1 [[UDP]][c]
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* [[RXN0-1342]]
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* With common name(s):
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== Reaction(s) of unknown directionality ==
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** 1 a [protein]-3-O-(β-D-GlcA-(1→3)-β-D-Gal-(1→3)-β-D-Gal-(1→4)-β-D-Xyl)-L-serine[c] '''+''' 1 UDP-N-acetyl-α-D-glucosamine[c] '''=>''' 1 H+[c] '''+''' 1 a [protein]-3-O-(α-D-GlcNAc-(1→4)-β-D-GlcA-(1→3)-β-D-Gal-(1→3)-β-D-Gal-(1→4)-β-D-Xyl)-L-serine[c] '''+''' 1 UDP[c]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[Tiso_gene_10445]]
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** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_8143]]
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** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_4321]]
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** [[pantograph]]-[[esiliculosus]]
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== Pathways  ==
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* [[PWY-6558]], heparan sulfate biosynthesis (late stages): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6558 PWY-6558]
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** '''3''' reactions found over '''13''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-esiliculosus]]
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*** Tool: [[pantograph]]
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== External links  ==
 
== External links  ==
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* LIGAND-RXN:
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{{#set: common name=an epoxyqueuosine34 in tRNA}}
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** [http://www.genome.jp/dbget-bin/www_bget?R07397 R07397]
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{{#set: common name=an epoxyqueuosine at position 34 of a tRNA containing GUN anticodon}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: produced by=RXN0-1342}}
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{{#set: ec number=EC-2.4.1.223}}
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{{#set: gene associated=Tiso_gene_10445|Tiso_gene_8143|Tiso_gene_4321}}
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{{#set: in pathway=PWY-6558}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction source=orthology-esiliculosus}}
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{{#set: reconstruction tool=pantograph}}
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Latest revision as of 20:14, 21 March 2018

Metabolite tRNAs-containing-epoxy-quenosine

  • common name:
    • an epoxyqueuosine34 in tRNA
  • Synonym(s):
    • an epoxyqueuosine at position 34 of a tRNA containing GUN anticodon

Reaction(s) known to consume the compound

Reaction(s) known to produce the compound

Reaction(s) of unknown directionality

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=TRNAs-containing-epoxy-quenosine&oldid=40339"