Difference between revisions of "Tiso gene 10001"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=2.4.1.225-RXN 2.4.1.225-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** exostosin-1 * ec nu...")
 
(Created page with "Category:Gene == Gene Tiso_gene_10001 == * Synonym(s): == Reactions associated == * Reaction: 3.2.1.21-RXN ** Source: orthology-esiliculosus * Reaction: RXN-107...")
 
(3 intermediate revisions by the same user not shown)
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=2.4.1.225-RXN 2.4.1.225-RXN] ==
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== Gene Tiso_gene_10001 ==
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* direction:
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** LEFT-TO-RIGHT
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* common name:
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** exostosin-1
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* ec number:
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** [http://enzyme.expasy.org/EC/2.4.1.225 EC-2.4.1.225]
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* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[3.2.1.21-RXN]]
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** 1 [[GlcNAc-GlcA-Gal-Gal-Xyl-Protein]][c] '''+''' 1 [[UDP-GLUCURONATE]][c] '''=>''' 1 [[GlcA-GlcNAc-GlcA-Gal-Gal-Xyl-Protein]][c] '''+''' 1 [[UDP]][c] '''+''' 1 [[PROTON]][c]
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** Source: [[orthology-esiliculosus]]
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* With common name(s):
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* Reaction: [[RXN-10769]]
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** 1 a [protein]-3-O-(α-D-GlcNAc-(1→4)-β-D-GlcA-(1→3)-β-D-Gal-(1→3)-β-D-Gal-(1→4)-β-D-Xyl)-L-serine[c] '''+''' 1 UDP-α-D-glucuronate[c] '''=>''' 1 a [protein]-3-O-(β-D-GlcA-(1→3)-α-D-GlcNAc-(1→4)-β-D-GlcA-(1→3)-β-D-Gal-(1→3)-β-D-Gal-(1→4)-β-D-Xyl)-L-serine[c] '''+''' 1 UDP[c] '''+''' 1 H+[c]
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** Source: [[orthology-esiliculosus]]
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* Reaction: [[RXN-10773]]
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== Genes associated with this reaction  ==
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** Source: [[orthology-esiliculosus]]
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Genes have been associated with this reaction based on different elements listed below.
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* Reaction: [[RXN-13600]]
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* [[Tiso_gene_6495]]
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** Source: [[orthology-esiliculosus]]
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** IN-SILICO_ANNOTATION
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* Reaction: [[RXN-13602]]
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***EC-NUMBER
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** Source: [[orthology-esiliculosus]]
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== Pathways ==
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* Reaction: [[RXN-13603]]
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* [[PWY-6558]], heparan sulfate biosynthesis (late stages): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6558 PWY-6558]
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** Source: [[orthology-esiliculosus]]
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** '''3''' reactions found over '''13''' reactions in the full pathway
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* Reaction: [[RXN-14179]]
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== Reconstruction information  ==
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** Source: [[orthology-esiliculosus]]
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* [[annotation]]:
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* Reaction: [[RXN-5341]]
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** [[pathwaytools]]:
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** Source: [[orthology-esiliculosus]]
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*** [[in-silico_annotation]]
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* Reaction: [[RXN-8036]]
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** Source: [[orthology-esiliculosus]]
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* Reaction: [[RXN-9674]]
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** Source: [[orthology-esiliculosus]]
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== Pathways associated ==
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* [[PWY-3121]]
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* [[PWY-6002]]
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* [[PWY-6788]]
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* [[PWY-5176]]
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* [[PWY-7092]]
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* [[PWY-7091]]
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* [[PWY-7089]]
 
== External links  ==
 
== External links  ==
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* LIGAND-RXN:
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{{#set: reaction associated=3.2.1.21-RXN|RXN-10769|RXN-10773|RXN-13600|RXN-13602|RXN-13603|RXN-14179|RXN-5341|RXN-8036|RXN-9674}}
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** [http://www.genome.jp/dbget-bin/www_bget?R07335 R07335]
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{{#set: pathway associated=PWY-3121|PWY-6002|PWY-6788|PWY-5176|PWY-7092|PWY-7091|PWY-7089}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=exostosin-1}}
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{{#set: ec number=EC-2.4.1.225}}
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{{#set: gene associated=Tiso_gene_6495}}
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{{#set: in pathway=PWY-6558}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction source=in-silico_annotation}}
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Latest revision as of 21:22, 21 March 2018

Gene Tiso_gene_10001

  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_10001&oldid=48169"