Difference between revisions of "Tiso gene 10015"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-6554 RXN0-6554] == * direction: ** LEFT-TO-RIGHT * common name: ** ORF * ec number: ** [http:/...")
(Created page with "Category:Gene == Gene Tiso_gene_10015 == * right end position: ** 6470 * transcription direction: ** NEGATIVE * left end position: ** 5829 * centisome position: ** 65.4502...")
 
(One intermediate revision by the same user not shown)
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-6554 RXN0-6554] ==
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== Gene Tiso_gene_10015 ==
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* direction:
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* right end position:
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** LEFT-TO-RIGHT
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** 6470
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* common name:
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* transcription direction:
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** ORF
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** NEGATIVE
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* ec number:
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* left end position:
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** [http://enzyme.expasy.org/EC/1.3.5.2 EC-1.3.5.2]
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** 5829
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* centisome position:
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** 65.45026   
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[RXN-11696]]
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** 1 [[DI-H-OROTATE]][c] '''+''' 1 [[Menaquinones]][c] '''=>''' 1 [[Menaquinols]][c] '''+''' 1 [[OROTATE]][c]
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** Source: [[annotation-in-silico_annotation]]
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* With common name(s):
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*** Assignment: ec-number
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** 1 (S)-dihydroorotate[c] '''+''' 1 a menaquinone[c] '''=>''' 1 a menaquinol[c] '''+''' 1 orotate[c]
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* Reaction: [[RXN0-2161]]
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** Source: [[annotation-in-silico_annotation]]
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== Genes associated with this reaction  ==
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*** Assignment: ec-number
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Genes have been associated with this reaction based on different elements listed below.
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* Reaction: [[SERINE--TRNA-LIGASE-RXN]]
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* [[Tiso_gene_5280]]
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** Source: [[annotation-in-silico_annotation]]
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** [[pantograph]]-[[esiliculosus]]
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*** Assignment: ec-number
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* [[Tiso_gene_4735]]
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* Reaction: [[VINYLACETYL-COA-DELTA-ISOMERASE-RXN]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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== Pathways  ==
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-esiliculosus]]
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*** Tool: [[pantograph]]
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* Category: [[annotation]]
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** Source: [[annotation-in-silico_annotation]]
 
** Source: [[annotation-in-silico_annotation]]
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*** Tool: [[pathwaytools]]
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*** Assignment: ec-number
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== Pathways associated ==
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* [[TRNA-CHARGING-PWY]]
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* [[PWY0-901]]
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* [[PWY-6281]]
 
== External links  ==
 
== External links  ==
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: right end position=6470}}
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{{#set: common name=ORF}}
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{{#set: transcription direction=NEGATIVE}}
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{{#set: ec number=EC-1.3.5.2}}
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{{#set: left end position=5829}}
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{{#set: gene associated=Tiso_gene_5280|Tiso_gene_4735}}
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{{#set: centisome position=65.45026    }}
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{{#set: in pathway=}}
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{{#set: reaction associated=RXN-11696|RXN0-2161|SERINE--TRNA-LIGASE-RXN|VINYLACETYL-COA-DELTA-ISOMERASE-RXN}}
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{{#set: reconstruction category=orthology|annotation}}
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{{#set: pathway associated=TRNA-CHARGING-PWY|PWY0-901|PWY-6281}}
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{{#set: reconstruction source=annotation-in-silico_annotation|orthology-esiliculosus}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}
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Latest revision as of 21:19, 21 March 2018

Gene Tiso_gene_10015

  • right end position:
    • 6470
  • transcription direction:
    • NEGATIVE
  • left end position:
    • 5829
  • centisome position:
    • 65.45026
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_10015&oldid=47744"