Difference between revisions of "Tiso gene 10084"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-16402 RXN-16402] == * direction: ** LEFT-TO-RIGHT * common name: ** polyketide_synthase ** long...")
(Created page with "Category:Gene == Gene Tiso_gene_10084 == * right end position: ** 8532 * transcription direction: ** POSITIVE * left end position: ** 6344 * centisome position: ** 71.8297...")
 
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[[Category:Reaction]]
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[[Category:Gene]]
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-16402 RXN-16402] ==
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== Gene Tiso_gene_10084 ==
* direction:
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* right end position:
** LEFT-TO-RIGHT
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** 8532
* common name:
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* transcription direction:
** polyketide_synthase
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** POSITIVE
** long_chain_acyl-_synthetase
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* left end position:
** ORF
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** 6344
** acyl-_synthetase
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* centisome position:
* ec number:
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** 71.82971   
** [http://enzyme.expasy.org/EC/6.2.1.3 EC-6.2.1.3]
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* Synonym(s):
 
* Synonym(s):
  
== Reaction Formula ==
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== Reactions associated ==
* With identifiers:
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* Reaction: [[PEPTIDYLPROLYL-ISOMERASE-RXN]]
** 1 [[CO-A]][c] '''+''' 1 [[18-HYDROXYOLEATE]][c] '''+''' 1 [[ATP]][c] '''=>''' 1 [[AMP]][c] '''+''' 1 [[PPI]][c] '''+''' 1 [[CPD-17370]][c]
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* With common name(s):
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** 1 coenzyme A[c] '''+''' 1 18-hydroxyoleate[c] '''+''' 1 ATP[c] '''=>''' 1 AMP[c] '''+''' 1 diphosphate[c] '''+''' 1 18-hydroxyoleoyl-CoA[c]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* Gene: [[Tiso_gene_7855]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: EC-NUMBER
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* Gene: [[Tiso_gene_500]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: EC-NUMBER
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* Gene: [[Tiso_gene_10876]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: EC-NUMBER
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* Gene: [[Tiso_gene_135]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: EC-NUMBER
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* Gene: [[Tiso_gene_348]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: EC-NUMBER
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** Source: [[annotation-experimental_annotation]]
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*** Assignment: EC-NUMBER
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* Gene: [[Tiso_gene_9394]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: EC-NUMBER
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** Source: [[annotation-experimental_annotation]]
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*** Assignment: EC-NUMBER
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* Gene: [[Tiso_gene_4191]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: EC-NUMBER
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** Source: [[annotation-experimental_annotation]]
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*** Assignment: EC-NUMBER
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* Gene: [[Tiso_gene_136]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: EC-NUMBER
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* Gene: [[Tiso_gene_13394]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: EC-NUMBER
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== Pathways  ==
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* [[PWY-6733]], sporopollenin precursors biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6733 PWY-6733]
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** '''8''' reactions found over '''18''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[annotation]]
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** Source: [[annotation-experimental_annotation]]
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*** Tool: [[pathwaytools]]
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** Source: [[annotation-in-silico_annotation]]
 
** Source: [[annotation-in-silico_annotation]]
*** Tool: [[pathwaytools]]
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*** Assignment: automated-name-match
 +
** Source: [[orthology-esiliculosus]]
 +
== Pathways associated ==
 
== External links  ==
 
== External links  ==
{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: right end position=8532}}
{{#set: common name=polyketide_synthase}}
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{{#set: transcription direction=POSITIVE}}
{{#set: common name=long_chain_acyl-_synthetase}}
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{{#set: left end position=6344}}
{{#set: common name=ORF}}
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{{#set: centisome position=71.82971    }}
{{#set: common name=acyl-_synthetase}}
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{{#set: reaction associated=PEPTIDYLPROLYL-ISOMERASE-RXN}}
{{#set: ec number=EC-6.2.1.3}}
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{{#set: gene associated=Tiso_gene_7855|Tiso_gene_500|Tiso_gene_10876|Tiso_gene_135|Tiso_gene_348|Tiso_gene_9394|Tiso_gene_4191|Tiso_gene_136|Tiso_gene_13394}}
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{{#set: in pathway=PWY-6733}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction source=annotation-experimental_annotation|annotation-in-silico_annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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Latest revision as of 21:23, 21 March 2018

Gene Tiso_gene_10084

  • right end position:
    • 8532
  • transcription direction:
    • POSITIVE
  • left end position:
    • 6344
  • centisome position:
    • 71.82971
  • Synonym(s):

Reactions associated

Pathways associated

External links