Difference between revisions of "Tiso gene 10173"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=3-HYDROXYBUTYRYL-COA-DEHYDROGENASE-RXN 3-HYDROXYBUTYRYL-COA-DEHYDROGENASE-RXN] == * direction: ** L...")
(Created page with "Category:Gene == Gene Tiso_gene_4171 == * right end position: ** 11971 * transcription direction: ** POSITIVE * left end position: ** 10170 * centisome position: ** 66.627...")
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=3-HYDROXYBUTYRYL-COA-DEHYDROGENASE-RXN 3-HYDROXYBUTYRYL-COA-DEHYDROGENASE-RXN] ==
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== Gene Tiso_gene_4171 ==
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* direction:
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* right end position:
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** LEFT-TO-RIGHT
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** 11971
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* ec number:
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* transcription direction:
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** [http://enzyme.expasy.org/EC/1.1.1.157 EC-1.1.1.157]
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** POSITIVE
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* left end position:
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** 10170
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* centisome position:
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** 66.62736   
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[DIPHOSPHOMEVALONTE-DECARBOXYLASE-RXN]]
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** 1 [[NADPH]][c] '''+''' 1 [[ACETOACETYL-COA]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[NADP]][c] '''+''' 1 [[S-3-HYDROXYBUTANOYL-COA]][c]
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** Source: [[annotation-in-silico_annotation]]
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* With common name(s):
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*** Assignment: automated-name-match
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** 1 NADPH[c] '''+''' 1 acetoacetyl-CoA[c] '''+''' 1 H+[c] '''=>''' 1 NADP+[c] '''+''' 1 (S)-3-hydroxybutanoyl-CoA[c]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[Tiso_gene_14027]]
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** [[pantograph]]-[[athaliana]]
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** [[pantograph]]-[[esiliculosus]]
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** [[pantograph]]-[[creinhardtii]]
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* [[Tiso_gene_14026]]
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** [[pantograph]]-[[athaliana]]
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** [[pantograph]]-[[esiliculosus]]
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** [[pantograph]]-[[creinhardtii]]
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== Pathways  ==
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-athaliana]]
 
** Source: [[orthology-athaliana]]
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*** Tool: [[pantograph]]
 
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** Source: [[orthology-creinhardtii]]
 
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*** Tool: [[pantograph]]
 
 
** Source: [[orthology-esiliculosus]]
 
** Source: [[orthology-esiliculosus]]
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*** Tool: [[pantograph]]
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== Pathways associated ==
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* [[PWY-922]]
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* [[PWY-7391]]
 
== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: right end position=11971}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=16197 16197]
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{{#set: transcription direction=POSITIVE}}
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* LIGAND-RXN:
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{{#set: left end position=10170}}
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** [http://www.genome.jp/dbget-bin/www_bget?R01976 R01976]
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{{#set: centisome position=66.62736    }}
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* UNIPROT:
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{{#set: reaction associated=DIPHOSPHOMEVALONTE-DECARBOXYLASE-RXN}}
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** [http://www.uniprot.org/uniprot/P76083 P76083]
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{{#set: pathway associated=PWY-922|PWY-7391}}
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** [http://www.uniprot.org/uniprot/P52041 P52041]
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** [http://www.uniprot.org/uniprot/Q9L8D9 Q9L8D9]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: ec number=EC-1.1.1.157}}
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{{#set: gene associated=Tiso_gene_14027|Tiso_gene_14026}}
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{{#set: in pathway=}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction source=orthology-athaliana|orthology-creinhardtii|orthology-esiliculosus}}
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{{#set: reconstruction tool=pantograph}}
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Revision as of 16:37, 21 March 2018

Gene Tiso_gene_4171

  • right end position:
    • 11971
  • transcription direction:
    • POSITIVE
  • left end position:
    • 10170
  • centisome position:
    • 66.62736
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_10173&oldid=35204"