Difference between revisions of "Tiso gene 10324"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=PEPCARBOXYKIN-RXN PEPCARBOXYKIN-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** Phosphoenol...")
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-7112 PWY-7112] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-33154 TAX-3...")
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[[Category:Reaction]]
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[[Category:Pathway]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=PEPCARBOXYKIN-RXN PEPCARBOXYKIN-RXN] ==
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-7112 PWY-7112] ==
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* direction:
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* taxonomic range:
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** LEFT-TO-RIGHT
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-33154 TAX-33154]
 
* common name:
 
* common name:
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** Phosphoenolpyruvate carboxykinase [ATP]
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** 4-hydroxy-2-nonenal detoxification
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* ec number:
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** [http://enzyme.expasy.org/EC/4.1.1.49 EC-4.1.1.49]
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* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reaction(s) found ==
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* With identifiers:
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'''2''' reactions found over '''4''' reactions in the full pathway
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** 1 [[ATP]][c] '''+''' 1 [[OXALACETIC_ACID]][c] '''=>''' 1 [[PHOSPHO-ENOL-PYRUVATE]][c] '''+''' 1 [[ADP]][c] '''+''' 1 [[CARBON-DIOXIDE]][c]
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* [[RXN-13673]]
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* With common name(s):
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** 11 associated gene(s):
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** 1 ATP[c] '''+''' 1 oxaloacetate[c] '''=>''' 1 phosphoenolpyruvate[c] '''+''' 1 ADP[c] '''+''' 1 CO2[c]
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*** [[Tiso_gene_5129]]
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*** [[Tiso_gene_19041]]
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== Genes associated with this reaction  ==
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*** [[Tiso_gene_2775]]
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Genes have been associated with this reaction based on different elements listed below.
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*** [[Tiso_gene_8389]]
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* [[Tiso_gene_19475]]
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*** [[Tiso_gene_3233]]
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** EXPERIMENTAL_ANNOTATION
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*** [[Tiso_gene_1104]]
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***AUTOMATED-NAME-MATCH
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*** [[Tiso_gene_6036]]
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** [[pantograph]]-[[athaliana]]
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*** [[Tiso_gene_19791]]
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** [[pantograph]]-[[esiliculosus]]
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*** [[Tiso_gene_20110]]
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** [[pantograph]]-[[creinhardtii]]
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*** [[Tiso_gene_8508]]
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** [[pantograph]]-[[creinhardtii]]
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*** [[Tiso_gene_8509]]
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== Pathways  ==
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** 3 reconstruction source(s) associated:
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* [[PWY-561]], superpathway of glyoxylate cycle and fatty acid degradation: [http://metacyc.org/META/NEW-IMAGE?object=PWY-561 PWY-561]
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*** [[annotation-in-silico_annotation]]
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** '''5''' reactions found over '''8''' reactions in the full pathway
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*** [[annotation-experimental_annotation]]
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* [[PWY-7117]], C4 photosynthetic carbon assimilation cycle, PEPCK type: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7117 PWY-7117]
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*** [[orthology-esiliculosus]]
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** '''7''' reactions found over '''10''' reactions in the full pathway
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* [[RXN-13677]]
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* [[GLUCONEO-PWY]], gluconeogenesis I: [http://metacyc.org/META/NEW-IMAGE?object=GLUCONEO-PWY GLUCONEO-PWY]
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** 2 associated gene(s):
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** '''13''' reactions found over '''13''' reactions in the full pathway
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*** [[Tiso_gene_16906]]
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== Reconstruction information  ==
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*** [[Tiso_gene_860]]
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* [[orthology]]:
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** 2 reconstruction source(s) associated:
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** [[pantograph]]:
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*** [[annotation-in-silico_annotation]]
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*** [[creinhardtii]]
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*** [[orthology-esiliculosus]]
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*** [[athaliana]]
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== Reaction(s) not found ==
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*** [[esiliculosus]]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-13675 RXN-13675]
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* [[manual]]:
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-13678 RXN-13678]
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** [[primary_network]]
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* [[annotation]]:
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** [[pathwaytools]]:
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*** [[experimental_annotation]]
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== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: taxonomic range=TAX-33154}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=18617 18617]
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{{#set: common name=4-hydroxy-2-nonenal detoxification}}
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* LIGAND-RXN:
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{{#set: reaction found=2}}
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** [http://www.genome.jp/dbget-bin/www_bget?R00341 R00341]
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{{#set: total reaction=4}}
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* UNIPROT:
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{{#set: completion rate=50.0}}
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** [http://www.uniprot.org/uniprot/P10963 P10963]
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** [http://www.uniprot.org/uniprot/Q9PP01 Q9PP01]
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** [http://www.uniprot.org/uniprot/P43923 P43923]
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** [http://www.uniprot.org/uniprot/P22259 P22259]
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** [http://www.uniprot.org/uniprot/P42066 P42066]
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** [http://www.uniprot.org/uniprot/P49292 P49292]
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** [http://www.uniprot.org/uniprot/O49547 O49547]
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** [http://www.uniprot.org/uniprot/Q9T074 Q9T074]
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** [http://www.uniprot.org/uniprot/Q39294 Q39294]
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** [http://www.uniprot.org/uniprot/Q9RC49 Q9RC49]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=Phosphoenolpyruvate carboxykinase [ATP]}}
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{{#set: ec number=EC-4.1.1.49}}
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{{#set: gene associated=Tiso_gene_19475}}
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{{#set: in pathway=PWY-561|PWY-7117|GLUCONEO-PWY}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction tool=pantograph}}
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{{#set: reconstruction source=creinhardtii|athaliana|esiliculosus}}
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{{#set: reconstruction category=manual}}
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{{#set: reconstruction source=primary_network}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction source=experimental_annotation}}
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Revision as of 19:09, 18 March 2018

Pathway PWY-7112

  • taxonomic range:
  • common name:
    • 4-hydroxy-2-nonenal detoxification
  • Synonym(s):

Reaction(s) found

2 reactions found over 4 reactions in the full pathway

Reaction(s) not found

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_10324&oldid=22352"