Difference between revisions of "Tiso gene 10445"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=CYSTATHIONINE-BETA-SYNTHASE-RXN CYSTATHIONINE-BETA-SYNTHASE-RXN] == * direction: ** REVERSIBLE * co...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=3.2.1.14-RXN 3.2.1.14-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** glycoside_hydrolase_f...")
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=CYSTATHIONINE-BETA-SYNTHASE-RXN CYSTATHIONINE-BETA-SYNTHASE-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=3.2.1.14-RXN 3.2.1.14-RXN] ==
 
* direction:
 
* direction:
−
** REVERSIBLE
+
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** cysteine
+
** glycoside_hydrolase_family_18_protein
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/4.2.1.22 EC-4.2.1.22]
+
** [http://enzyme.expasy.org/EC/3.2.1.14 EC-3.2.1.14]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[SER]][c] '''+''' 1 [[HOMO-CYS]][c] '''<=>''' 1 [[L-CYSTATHIONINE]][c] '''+''' 1 [[WATER]][c]
+
** 1 [[WATER]][c] '''+''' 1 [[CHITIN]][c] '''=>''' 2 [[Chitodextrins]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 L-serine[c] '''+''' 1 L-homocysteine[c] '''<=>''' 1 L-cystathionine[c] '''+''' 1 H2O[c]
+
** 1 H2O[c] '''+''' 1 chitin[c] '''=>''' 2 a chitodextrin[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Tiso_gene_7852]]
+
* [[Tiso_gene_10265]]
 
** IN-SILICO_ANNOTATION
 
** IN-SILICO_ANNOTATION
 
***EC-NUMBER
 
***EC-NUMBER
−
** [[pantograph]]-[[esiliculosus]]
 
−
* [[Tiso_gene_3732]]
 
−
** [[pantograph]]-[[creinhardtii]]
 
 
== Pathways  ==
 
== Pathways  ==
−
* [[HOMOCYSDEGR-PWY]], L-cysteine biosynthesis III (from L-homocysteine): [http://metacyc.org/META/NEW-IMAGE?object=HOMOCYSDEGR-PWY HOMOCYSDEGR-PWY]
+
* [[PWY-7822]], chitin degradation III (Serratia): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7822 PWY-7822]
−
** '''4''' reactions found over '''4''' reactions in the full pathway
+
** '''2''' reactions found over '''7''' reactions in the full pathway
−
* [[PWY-I9]], L-cysteine biosynthesis VI (from L-methionine): [http://metacyc.org/META/NEW-IMAGE?object=PWY-I9 PWY-I9]
+
* [[PWY-6902]], chitin degradation II (Vibrio): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6902 PWY-6902]
−
** '''5''' reactions found over '''7''' reactions in the full pathway
+
** '''3''' reactions found over '''5''' reactions in the full pathway
−
* [[PWY-801]], L-homocysteine and L-cysteine interconversion: [http://metacyc.org/META/NEW-IMAGE?object=PWY-801 PWY-801]
+
* [[PWY-6855]], chitin degradation I (archaea): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6855 PWY-6855]
−
** '''3''' reactions found over '''3''' reactions in the full pathway
+
** '''1''' reactions found over '''7''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[orthology]]:
 
−
** [[pantograph]]:
 
−
*** [[creinhardtii]]
 
−
*** [[esiliculosus]]
 
 
* [[annotation]]:
 
* [[annotation]]:
 
** [[pathwaytools]]:
 
** [[pathwaytools]]:
 
*** [[in-silico_annotation]]
 
*** [[in-silico_annotation]]
 
== External links  ==
 
== External links  ==
−
* RHEA:
 
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=10112 10112]
 
−
* LIGAND-RXN:
 
−
** [http://www.genome.jp/dbget-bin/www_bget?R01290 R01290]
 
 
* UNIPROT:
 
* UNIPROT:
−
** [http://www.uniprot.org/uniprot/P32232 P32232]
+
** [http://www.uniprot.org/uniprot/P07254 P07254]
−
** [http://www.uniprot.org/uniprot/P32582 P32582]
+
** [http://www.uniprot.org/uniprot/P23951 P23951]
−
** [http://www.uniprot.org/uniprot/P35520 P35520]
+
** [http://www.uniprot.org/uniprot/P17541 P17541]
−
** [http://www.uniprot.org/uniprot/Q9YCN5 Q9YCN5]
+
** [http://www.uniprot.org/uniprot/P29030 P29030]
−
** [http://www.uniprot.org/uniprot/Q12633 Q12633]
+
** [http://www.uniprot.org/uniprot/P20533 P20533]
−
** [http://www.uniprot.org/uniprot/P72662 P72662]
+
** [http://www.uniprot.org/uniprot/P29029 P29029]
−
** [http://www.uniprot.org/uniprot/O59701 O59701]
+
** [http://www.uniprot.org/uniprot/P27050 P27050]
−
{{#set: direction=REVERSIBLE}}
+
** [http://www.uniprot.org/uniprot/P11218 P11218]
−
{{#set: common name=cysteine}}
+
** [http://www.uniprot.org/uniprot/P29115 P29115]
−
{{#set: ec number=EC-4.2.1.22}}
+
** [http://www.uniprot.org/uniprot/Q54501 Q54501]
−
{{#set: gene associated=Tiso_gene_7852|Tiso_gene_3732}}
+
** [http://www.uniprot.org/uniprot/P19172 P19172]
−
{{#set: in pathway=HOMOCYSDEGR-PWY|PWY-I9|PWY-801}}
+
** [http://www.uniprot.org/uniprot/P29026 P29026]
−
{{#set: reconstruction category=orthology}}
+
** [http://www.uniprot.org/uniprot/Q23737 Q23737]
−
{{#set: reconstruction tool=pantograph}}
+
** [http://www.uniprot.org/uniprot/P36362 P36362]
−
{{#set: reconstruction source=creinhardtii|esiliculosus}}
+
** [http://www.uniprot.org/uniprot/P19171 P19171]
 +
** [http://www.uniprot.org/uniprot/P29027 P29027]
 +
** [http://www.uniprot.org/uniprot/P29116 P29116]
 +
** [http://www.uniprot.org/uniprot/Q9R5K8 Q9R5K8]
 +
** [http://www.uniprot.org/uniprot/Q7M233 Q7M233]
 +
** [http://www.uniprot.org/uniprot/Q9R5K7 Q9R5K7]
 +
** [http://www.uniprot.org/uniprot/Q9CE95 Q9CE95]
 +
** [http://www.uniprot.org/uniprot/Q59145 Q59145]
 +
** [http://www.uniprot.org/uniprot/Q9FRV1 Q9FRV1]
 +
** [http://www.uniprot.org/uniprot/Q56077 Q56077]
 +
** [http://www.uniprot.org/uniprot/Q40667 Q40667]
 +
** [http://www.uniprot.org/uniprot/Q40668 Q40668]
 +
** [http://www.uniprot.org/uniprot/Q9S9F7 Q9S9F7]
 +
** [http://www.uniprot.org/uniprot/P54196 P54196]
 +
** [http://www.uniprot.org/uniprot/O49824 O49824]
 +
** [http://www.uniprot.org/uniprot/O49825 O49825]
 +
** [http://www.uniprot.org/uniprot/O49826 O49826]
 +
** [http://www.uniprot.org/uniprot/O49827 O49827]
 +
** [http://www.uniprot.org/uniprot/Q7GCM7 Q7GCM7]
 +
** [http://www.uniprot.org/uniprot/O22080 O22080]
 +
** [http://www.uniprot.org/uniprot/O49830 O49830]
 +
** [http://www.uniprot.org/uniprot/Q9SXY2 Q9SXY2]
 +
** [http://www.uniprot.org/uniprot/O60994 O60994]
 +
** [http://www.uniprot.org/uniprot/Q9RHU3 Q9RHU3]
 +
** [http://www.uniprot.org/uniprot/Q9SLP4 Q9SLP4]
 +
** [http://www.uniprot.org/uniprot/Q9RHU5 Q9RHU5]
 +
** [http://www.uniprot.org/uniprot/Q9RHU4 Q9RHU4]
 +
** [http://www.uniprot.org/uniprot/Q7M1Q9 Q7M1Q9]
 +
** [http://www.uniprot.org/uniprot/Q7M443 Q7M443]
 +
** [http://www.uniprot.org/uniprot/Q9S7G9 Q9S7G9]
 +
** [http://www.uniprot.org/uniprot/P11220 P11220]
 +
** [http://www.uniprot.org/uniprot/Q59924 Q59924]
 +
** [http://www.uniprot.org/uniprot/Q9FRV0 Q9FRV0]
 +
** [http://www.uniprot.org/uniprot/P36361 P36361]
 +
** [http://www.uniprot.org/uniprot/P32470 P32470]
 +
** [http://www.uniprot.org/uniprot/Q92223 Q92223]
 +
** [http://www.uniprot.org/uniprot/Q7M1R1 Q7M1R1]
 +
** [http://www.uniprot.org/uniprot/P14529 P14529]
 +
** [http://www.uniprot.org/uniprot/Q9S8X7 Q9S8X7]
 +
** [http://www.uniprot.org/uniprot/P11955 P11955]
 +
** [http://www.uniprot.org/uniprot/P11797 P11797]
 +
** [http://www.uniprot.org/uniprot/P05315 P05315]
 +
** [http://www.uniprot.org/uniprot/P08252 P08252]
 +
** [http://www.uniprot.org/uniprot/P24626 P24626]
 +
** [http://www.uniprot.org/uniprot/P25765 P25765]
 +
** [http://www.uniprot.org/uniprot/P27054 P27054]
 +
** [http://www.uniprot.org/uniprot/P17513 P17513]
 +
** [http://www.uniprot.org/uniprot/P17514 P17514]
 +
** [http://www.uniprot.org/uniprot/P29021 P29021]
 +
** [http://www.uniprot.org/uniprot/P24091 P24091]
 +
** [http://www.uniprot.org/uniprot/P29059 P29059]
 +
** [http://www.uniprot.org/uniprot/P29060 P29060]
 +
** [http://www.uniprot.org/uniprot/P29061 P29061]
 +
** [http://www.uniprot.org/uniprot/Q06209 Q06209]
 +
** [http://www.uniprot.org/uniprot/Q43184 Q43184]
 +
** [http://www.uniprot.org/uniprot/P36908 P36908]
 +
** [http://www.uniprot.org/uniprot/Q05638 Q05638]
 +
** [http://www.uniprot.org/uniprot/P29025 P29025]
 +
** [http://www.uniprot.org/uniprot/P29024 P29024]
 +
** [http://www.uniprot.org/uniprot/Q05537 Q05537]
 +
** [http://www.uniprot.org/uniprot/Q05540 Q05540]
 +
** [http://www.uniprot.org/uniprot/Q05539 Q05539]
 +
** [http://www.uniprot.org/uniprot/Q05538 Q05538]
 +
** [http://www.uniprot.org/uniprot/Q41539 Q41539]
 +
** [http://www.uniprot.org/uniprot/Q43294 Q43294]
 +
** [http://www.uniprot.org/uniprot/P52405 P52405]
 +
** [http://www.uniprot.org/uniprot/P42820 P42820]
 +
** [http://www.uniprot.org/uniprot/Q12735 Q12735]
 +
** [http://www.uniprot.org/uniprot/Q43764 Q43764]
 +
** [http://www.uniprot.org/uniprot/Q43765 Q43765]
 +
** [http://www.uniprot.org/uniprot/Q40114 Q40114]
 +
** [http://www.uniprot.org/uniprot/Q43591 Q43591]
 +
** [http://www.uniprot.org/uniprot/Q43151 Q43151]
 +
** [http://www.uniprot.org/uniprot/Q43150 Q43150]
 +
** [http://www.uniprot.org/uniprot/Q42421 Q42421]
 +
** [http://www.uniprot.org/uniprot/Q54276 Q54276]
 +
** [http://www.uniprot.org/uniprot/Q42995 Q42995]
 +
** [http://www.uniprot.org/uniprot/P21226 P21226]
 +
** [http://www.uniprot.org/uniprot/Q43683 Q43683]
 +
** [http://www.uniprot.org/uniprot/Q43684 Q43684]
 +
** [http://www.uniprot.org/uniprot/Q12631 Q12631]
 +
** [http://www.uniprot.org/uniprot/P36907 P36907]
 +
** [http://www.uniprot.org/uniprot/Q09023 Q09023]
 +
** [http://www.uniprot.org/uniprot/Q12713 Q12713]
 +
** [http://www.uniprot.org/uniprot/P52403 P52403]
 +
** [http://www.uniprot.org/uniprot/P52404 P52404]
 +
** [http://www.uniprot.org/uniprot/P52406 P52406]
 +
** [http://www.uniprot.org/uniprot/Q43322 Q43322]
 +
** [http://www.uniprot.org/uniprot/Q42515 Q42515]
 +
** [http://www.uniprot.org/uniprot/Q59141 Q59141]
 +
** [http://www.uniprot.org/uniprot/Q59142 Q59142]
 +
** [http://www.uniprot.org/uniprot/Q59143 Q59143]
 +
** [http://www.uniprot.org/uniprot/Q59144 Q59144]
 +
** [http://www.uniprot.org/uniprot/Q42878 Q42878]
 +
** [http://www.uniprot.org/uniprot/P93154 P93154]
 +
** [http://www.uniprot.org/uniprot/O50076 O50076]
 +
** [http://www.uniprot.org/uniprot/Q9ZSI6 Q9ZSI6]
 +
** [http://www.uniprot.org/uniprot/P93518 P93518]
 +
** [http://www.uniprot.org/uniprot/O24007 O24007]
 +
** [http://www.uniprot.org/uniprot/Q41794 Q41794]
 +
** [http://www.uniprot.org/uniprot/Q41795 Q41795]
 +
** [http://www.uniprot.org/uniprot/Q42970 Q42970]
 +
** [http://www.uniprot.org/uniprot/O04138 O04138]
 +
** [http://www.uniprot.org/uniprot/O04272 O04272]
 +
** [http://www.uniprot.org/uniprot/Q42993 Q42993]
 +
** [http://www.uniprot.org/uniprot/Q42839 Q42839]
 +
** [http://www.uniprot.org/uniprot/O48642 O48642]
 +
** [http://www.uniprot.org/uniprot/Q43852 Q43852]
 +
** [http://www.uniprot.org/uniprot/O81144 O81144]
 +
** [http://www.uniprot.org/uniprot/O81145 O81145]
 +
** [http://www.uniprot.org/uniprot/O65213 O65213]
 +
** [http://www.uniprot.org/uniprot/Q40838 Q40838]
 +
** [http://www.uniprot.org/uniprot/P94084 P94084]
 +
** [http://www.uniprot.org/uniprot/Q43752 Q43752]
 +
** [http://www.uniprot.org/uniprot/Q39656 Q39656]
 +
** [http://www.uniprot.org/uniprot/Q39657 Q39657]
 +
** [http://www.uniprot.org/uniprot/P23472 P23472]
 +
** [http://www.uniprot.org/uniprot/Q39799 Q39799]
 +
** [http://www.uniprot.org/uniprot/Q39785 Q39785]
 +
** [http://www.uniprot.org/uniprot/O17412 O17412]
 +
** [http://www.uniprot.org/uniprot/O04222 O04222]
 +
** [http://www.uniprot.org/uniprot/Q96408 Q96408]
 +
** [http://www.uniprot.org/uniprot/Q96409 Q96409]
 +
** [http://www.uniprot.org/uniprot/Q96410 Q96410]
 +
** [http://www.uniprot.org/uniprot/Q96411 Q96411]
 +
** [http://www.uniprot.org/uniprot/Q84577 Q84577]
 +
** [http://www.uniprot.org/uniprot/P92013 P92013]
 +
** [http://www.uniprot.org/uniprot/P96156 P96156]
 +
** [http://www.uniprot.org/uniprot/P75020 P75020]
 +
** [http://www.uniprot.org/uniprot/Q9YMQ7 Q9YMQ7]
 +
** [http://www.uniprot.org/uniprot/Q9ZIX4 Q9ZIX4]
 +
** [http://www.uniprot.org/uniprot/Q11174 Q11174]
 +
** [http://www.uniprot.org/uniprot/O44079 O44079]
 +
{{#set: direction=LEFT-TO-RIGHT}}
 +
{{#set: common name=glycoside_hydrolase_family_18_protein}}
 +
{{#set: ec number=EC-3.2.1.14}}
 +
{{#set: gene associated=Tiso_gene_10265}}
 +
{{#set: in pathway=PWY-7822|PWY-6902|PWY-6855}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction source=in-silico_annotation}}
 
{{#set: reconstruction source=in-silico_annotation}}

Revision as of 17:00, 10 January 2018

Reaction 3.2.1.14-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • glycoside_hydrolase_family_18_protein
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 H2O[c] + 1 chitin[c] => 2 a chitodextrin[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-7822, chitin degradation III (Serratia): PWY-7822
    • 2 reactions found over 7 reactions in the full pathway
  • PWY-6902, chitin degradation II (Vibrio): PWY-6902
    • 3 reactions found over 5 reactions in the full pathway
  • PWY-6855, chitin degradation I (archaea): PWY-6855
    • 1 reactions found over 7 reactions in the full pathway

Reconstruction information

External links





Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_10445&oldid=11234"