Difference between revisions of "Tiso gene 10584"

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(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-1861 PWY-1861] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2] *...")
(Created page with "Category:Gene == Gene Tiso_gene_10584 == * right end position: ** 11620 * transcription direction: ** POSITIVE * left end position: ** 3901 * centisome position: ** 33.367...")
 
(One intermediate revision by the same user not shown)
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[[Category:Pathway]]
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[[Category:Gene]]
== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-1861 PWY-1861] ==
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== Gene Tiso_gene_10584 ==
* taxonomic range:
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* right end position:
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2]
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** 11620
* common name:
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* transcription direction:
** formaldehyde assimilation II (RuMP Cycle)
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** POSITIVE
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* left end position:
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** 3901
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* centisome position:
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** 33.367546   
 
* Synonym(s):
 
* Synonym(s):
** ribulose monophosphate cycle
 
** formaldehyde assimilation
 
** RuMP pathway
 
  
== Reaction(s) found ==
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== Reactions associated ==
'''7''' reactions found over '''9''' reactions in the full pathway
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* Reaction: [[ADENOSINETRIPHOSPHATASE-RXN]]
* [[1TRANSKETO-RXN]]
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** Source: [[orthology-esiliculosus]]
** 2 associated gene(s):
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* Reaction: [[ATPASE-RXN]]
*** [[Tiso_gene_5008]]
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** Source: [[annotation-in-silico_annotation]]
*** [[Tiso_gene_11559]]
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*** Assignment: ec-number
** 5 reconstruction source(s) associated:
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== Pathways associated ==
*** [[annotation-experimental_annotation]]
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*** [[orthology-athaliana]]
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*** [[annotation-in-silico_annotation]]
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*** [[orthology-synechocystis]]
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*** [[manual-primary_network]]
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* [[2TRANSKETO-RXN]]
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** 2 associated gene(s):
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*** [[Tiso_gene_11559]]
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*** [[Tiso_gene_5008]]
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** 5 reconstruction source(s) associated:
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*** [[annotation-experimental_annotation]]
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*** [[orthology-athaliana]]
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*** [[orthology-creinhardtii]]
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*** [[manual-primary_network]]
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*** [[annotation-in-silico_annotation]]
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* [[6PFRUCTPHOS-RXN]]
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** 2 associated gene(s):
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*** [[Tiso_gene_5733]]
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*** [[Tiso_gene_596]]
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** 6 reconstruction source(s) associated:
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*** [[annotation-experimental_annotation]]
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*** [[orthology-esiliculosus]]
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*** [[annotation-in-silico_annotation]]
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*** [[orthology-athaliana]]
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*** [[manual-primary_network]]
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*** [[orthology-creinhardtii]]
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* [[F16ALDOLASE-RXN]]
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** 6 associated gene(s):
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*** [[Tiso_gene_65]]
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*** [[Tiso_gene_9119]]
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*** [[Tiso_gene_9179]]
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*** [[Tiso_gene_12272]]
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*** [[Tiso_gene_14568]]
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*** [[Tiso_gene_9118]]
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** 5 reconstruction source(s) associated:
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*** [[annotation-in-silico_annotation]]
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*** [[manual-primary_network]]
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*** [[orthology-creinhardtii]]
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*** [[orthology-esiliculosus]]
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*** [[annotation-experimental_annotation]]
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* [[RIB5PISOM-RXN]]
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** 1 associated gene(s):
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*** [[Tiso_gene_18217]]
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** 5 reconstruction source(s) associated:
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*** [[orthology-athaliana]]
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*** [[annotation-in-silico_annotation]]
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*** [[orthology-synechocystis]]
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*** [[orthology-esiliculosus]]
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*** [[manual-primary_network]]
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* [[RIBULP3EPIM-RXN]]
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** 3 associated gene(s):
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*** [[Tiso_gene_4754]]
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*** [[Tiso_gene_19140]]
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*** [[Tiso_gene_10879]]
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** 7 reconstruction source(s) associated:
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*** [[annotation-experimental_annotation]]
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*** [[orthology-esiliculosus]]
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*** [[annotation-in-silico_annotation]]
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*** [[orthology-athaliana]]
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*** [[orthology-synechocystis]]
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*** [[manual-primary_network]]
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*** [[orthology-creinhardtii]]
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* [[TRANSALDOL-RXN]]
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** 2 associated gene(s):
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*** [[Tiso_gene_17601]]
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*** [[Tiso_gene_1831]]
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** 6 reconstruction source(s) associated:
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*** [[annotation-experimental_annotation]]
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*** [[orthology-esiliculosus]]
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*** [[annotation-in-silico_annotation]]
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*** [[orthology-athaliana]]
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*** [[manual-primary_network]]
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*** [[orthology-creinhardtii]]
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== Reaction(s) not found ==
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* [http://metacyc.org/META/NEW-IMAGE?object=R10-RXN R10-RXN]
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* [http://metacyc.org/META/NEW-IMAGE?object=R12-RXN R12-RXN]
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== External links  ==
 
== External links  ==
{{#set: taxonomic range=TAX-2}}
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{{#set: right end position=11620}}
{{#set: common name=formaldehyde assimilation II (RuMP Cycle)}}
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{{#set: transcription direction=POSITIVE}}
{{#set: common name=ribulose monophosphate cycle|formaldehyde assimilation|RuMP pathway}}
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{{#set: left end position=3901}}
{{#set: reaction found=7}}
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{{#set: centisome position=33.367546    }}
{{#set: total reaction=9}}
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{{#set: reaction associated=ADENOSINETRIPHOSPHATASE-RXN|ATPASE-RXN}}
{{#set: completion rate=78.0}}
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Latest revision as of 20:17, 21 March 2018

Gene Tiso_gene_10584

  • right end position:
    • 11620
  • transcription direction:
    • POSITIVE
  • left end position:
    • 3901
  • centisome position:
    • 33.367546
  • Synonym(s):

Reactions associated

Pathways associated

External links