Difference between revisions of "Tiso gene 10675"

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(Created page with "Category:Gene == Gene Tiso_gene_16670 == * left end position: ** 305 * transcription direction: ** NEGATIVE * right end position: ** 2307 * centisome position: ** 7.263634...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN1F-147 RXN1F-147] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/...")
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[[Category:Gene]]
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[[Category:Reaction]]
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== Gene Tiso_gene_16670 ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN1F-147 RXN1F-147] ==
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* left end position:
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* direction:
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** 305
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** LEFT-TO-RIGHT
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* transcription direction:
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* ec number:
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** NEGATIVE
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** [http://enzyme.expasy.org/EC/5.5.1.18 EC-5.5.1.18]
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* right end position:
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** 2307
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* centisome position:
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** 7.263634   
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* Synonym(s):
 
* Synonym(s):
  
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== Reactions associated ==
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== Reaction Formula ==
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* [[GLYCEROL-KIN-RXN]]
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* With identifiers:
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** [[pantograph]]-[[synechocystis]]
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** 1 [[CPD1F-114]][c] '''=>''' 1 [[CPD1F-115]][c]
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* [[RIBULOKIN-RXN]]
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* With common name(s):
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** in-silico_annotation
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** 1 all-trans-lycopene[c] '''=>''' 1 δ-carotene[c]
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***automated-name-match
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* [[RXN0-5116]]
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== Genes associated with this reaction  ==
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** in-silico_annotation
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Genes have been associated with this reaction based on different elements listed below.
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***automated-name-match
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* [[Tiso_gene_11980]]
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== Pathways associated ==
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** [[pantograph]]-[[athaliana]]
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* [[PWY-4261]]
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** [[pantograph]]-[[esiliculosus]]
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* [[ARABCAT-PWY]]
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** [[pantograph]]-[[creinhardtii]]
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* [[Tiso_gene_8263]]
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** [[pantograph]]-[[athaliana]]
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** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_4457]]
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** [[pantograph]]-[[athaliana]]
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* [[Tiso_gene_6282]]
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** [[pantograph]]-[[athaliana]]
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* [[Tiso_gene_3577]]
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** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_1547]]
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** [[pantograph]]-[[athaliana]]
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== Pathways ==
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* [[PWY-5946]], δ-carotene biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5946 PWY-5946]
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** '''1''' reactions found over '''1''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-athaliana]]
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*** Tool: [[pantograph]]
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** Source: [[orthology-creinhardtii]]
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*** Tool: [[pantograph]]
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** Source: [[orthology-esiliculosus]]
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*** Tool: [[pantograph]]
 
== External links  ==
 
== External links  ==
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{{#set: left end position=305}}
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* LIGAND-RXN:
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{{#set: transcription direction=NEGATIVE}}
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** [http://www.genome.jp/dbget-bin/www_bget?R06963 R06963]
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{{#set: right end position=2307}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: centisome position=7.263634    }}
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{{#set: ec number=EC-5.5.1.18}}
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{{#set: reaction associated=GLYCEROL-KIN-RXN|RIBULOKIN-RXN|RXN0-5116}}
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{{#set: gene associated=Tiso_gene_11980|Tiso_gene_8263|Tiso_gene_4457|Tiso_gene_6282|Tiso_gene_3577|Tiso_gene_1547}}
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{{#set: pathway associated=PWY-4261|ARABCAT-PWY}}
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{{#set: in pathway=PWY-5946}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction source=orthology-athaliana|orthology-creinhardtii|orthology-esiliculosus}}
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{{#set: reconstruction tool=pantograph}}

Revision as of 01:14, 19 March 2018

Reaction RXN1F-147

  • direction:
    • LEFT-TO-RIGHT
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 all-trans-lycopene[c] => 1 δ-carotene[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-5946, δ-carotene biosynthesis: PWY-5946
    • 1 reactions found over 1 reactions in the full pathway

Reconstruction information

External links




Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_10675&oldid=29326"