Difference between revisions of "Tiso gene 10896"

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(Created page with "Category:Gene == Gene Tiso_gene_3856 == * left end position: ** 1467 * transcription direction: ** NEGATIVE * right end position: ** 3334 * centisome position: ** 9.21193...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=OXALATE-DECARBOXYLASE-RXN OXALATE-DECARBOXYLASE-RXN] == * direction: ** LEFT-TO-RIGHT * ec number:...")
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[[Category:Gene]]
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[[Category:Reaction]]
== Gene Tiso_gene_3856 ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=OXALATE-DECARBOXYLASE-RXN OXALATE-DECARBOXYLASE-RXN] ==
* left end position:
+
* direction:
** 1467
+
** LEFT-TO-RIGHT
* transcription direction:
+
* ec number:
** NEGATIVE
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** [http://enzyme.expasy.org/EC/4.1.1.2 EC-4.1.1.2]
* right end position:
+
** 3334
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* centisome position:
+
** 9.21193   
+
 
* Synonym(s):
 
* Synonym(s):
  
== Reactions associated ==
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== Reaction Formula ==
* [[KETOACYLCOATHIOL-RXN]]
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* With identifiers:
** in-silico_annotation
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** 1 [[PROTON]][c] '''+''' 1 [[OXALATE]][c] '''=>''' 1 [[FORMATE]][c] '''+''' 1 [[CARBON-DIOXIDE]][c]
***ec-number
+
* With common name(s):
* [[RXN-10699]]
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** 1 H+[c] '''+''' 1 oxalate[c] '''=>''' 1 formate[c] '''+''' 1 CO2[c]
** in-silico_annotation
+
 
***ec-number
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== Genes associated with this reaction  ==
* [[RXN-10700]]
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Genes have been associated with this reaction based on different elements listed below.
** in-silico_annotation
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* [[Tiso_gene_13981]]
***ec-number
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** [[pantograph]]-[[synechocystis]]
* [[RXN-10701]]
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== Pathways ==
** in-silico_annotation
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* [[PWY-6698]], oxalate degradation V: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6698 PWY-6698]
***ec-number
+
** '''1''' reactions found over '''1''' reactions in the full pathway
* [[RXN-11246]]
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== Reconstruction information  ==
** in-silico_annotation
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* [[orthology]]:
***ec-number
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** [[pantograph]]:
* [[RXN-12565]]
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*** [[synechocystis]]
** in-silico_annotation
+
***ec-number
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* [[RXN-12710]]
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** in-silico_annotation
+
***ec-number
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* [[RXN-13617]]
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** in-silico_annotation
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***ec-number
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* [[RXN-14268]]
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** in-silico_annotation
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***ec-number
+
* [[RXN-14274]]
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** in-silico_annotation
+
***ec-number
+
* [[RXN-14277]]
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** in-silico_annotation
+
***ec-number
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* [[RXN-14394]]
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** in-silico_annotation
+
***ec-number
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* [[RXN-14774]]
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** in-silico_annotation
+
***ec-number
+
* [[RXN-14788]]
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** in-silico_annotation
+
***ec-number
+
* [[RXN-14793]]
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** in-silico_annotation
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***ec-number
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* [[RXN-14799]]
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** in-silico_annotation
+
***ec-number
+
* [[RXN-14803]]
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** in-silico_annotation
+
***ec-number
+
* [[RXN-16137]]
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** in-silico_annotation
+
***ec-number
+
* [[RXN-17116]]
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** in-silico_annotation
+
***ec-number
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* [[RXN-17778]]
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** in-silico_annotation
+
***ec-number
+
* [[RXN-17782]]
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** in-silico_annotation
+
***ec-number
+
* [[RXN-17787]]
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** in-silico_annotation
+
***ec-number
+
* [[RXN-17791]]
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** in-silico_annotation
+
***ec-number
+
* [[RXN-17795]]
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** in-silico_annotation
+
***ec-number
+
* [[RXN-17799]]
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** in-silico_annotation
+
***ec-number
+
== Pathways associated ==
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* [[PWY-6435]]
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* [[PWY-7654]]
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* [[PWY66-391]]
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* [[PWY-7606]]
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* [[PWY-7337]]
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* [[PWY-7340]]
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* [[PWY-7338]]
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* [[PWY-7094]]
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* [[PWY-6946]]
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* [[PWY-7288]]
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* [[PWY-735]]
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* [[PWY-5136]]
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* [[PWY-7726]]
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* [[PWY-6863]]
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* [[PWY-7339]]
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* [[PWY-6948]]
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* [[FAO-PWY]]
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* [[PWY-6945]]
+
 
== External links  ==
 
== External links  ==
{{#set: left end position=1467}}
+
* RHEA:
{{#set: transcription direction=NEGATIVE}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=16509 16509]
{{#set: right end position=3334}}
+
* LIGAND-RXN:
{{#set: centisome position=9.21193    }}
+
** [http://www.genome.jp/dbget-bin/www_bget?R00522 R00522]
{{#set: reaction associated=KETOACYLCOATHIOL-RXN|RXN-10699|RXN-10700|RXN-10701|RXN-11246|RXN-12565|RXN-12710|RXN-13617|RXN-14268|RXN-14274|RXN-14277|RXN-14394|RXN-14774|RXN-14788|RXN-14793|RXN-14799|RXN-14803|RXN-16137|RXN-17116|RXN-17778|RXN-17782|RXN-17787|RXN-17791|RXN-17795|RXN-17799}}
+
{{#set: direction=LEFT-TO-RIGHT}}
{{#set: pathway associated=PWY-6435|PWY-7654|PWY66-391|PWY-7606|PWY-7337|PWY-7340|PWY-7338|PWY-7094|PWY-6946|PWY-7288|PWY-735|PWY-5136|PWY-7726|PWY-6863|PWY-7339|PWY-6948|FAO-PWY|PWY-6945}}
+
{{#set: ec number=EC-4.1.1.2}}
 +
{{#set: gene associated=Tiso_gene_13981}}
 +
{{#set: in pathway=PWY-6698}}
 +
{{#set: reconstruction category=orthology}}
 +
{{#set: reconstruction tool=pantograph}}
 +
{{#set: reconstruction source=synechocystis}}

Revision as of 17:10, 10 January 2018

Reaction OXALATE-DECARBOXYLASE-RXN

  • direction:
    • LEFT-TO-RIGHT
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-6698, oxalate degradation V: PWY-6698
    • 1 reactions found over 1 reactions in the full pathway

Reconstruction information

External links