Difference between revisions of "Tiso gene 11155"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=KETOACYLCOATHIOL-RXN KETOACYLCOATHIOL-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** thiol...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=3.1.3.46-RXN 3.1.3.46-RXN] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.o...")
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=KETOACYLCOATHIOL-RXN KETOACYLCOATHIOL-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=3.1.3.46-RXN 3.1.3.46-RXN] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
−
* common name:
 
−
** thiolase
 
−
** acetyl-_c-acetyltransferase
 
−
** 3-ketoacyl-_thiolase
 
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/2.3.1.16 EC-2.3.1.16]
+
** [http://enzyme.expasy.org/EC/3.1.3.46 EC-3.1.3.46]
 
* Synonym(s):
 
* Synonym(s):
−
** Beta-ketothiolase
 
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[CO-A]][c] '''+''' 1 [[3-KETOACYL-COA]][c] '''=>''' 1 [[ACETYL-COA]][c] '''+''' 1 [[Saturated-Fatty-Acyl-CoA]][c]
+
** 1 [[CPD-535]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[FRUCTOSE-6P]][c] '''+''' 1 [[Pi]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 coenzyme A[c] '''+''' 1 a 3-oxoacyl-CoA[c] '''=>''' 1 acetyl-CoA[c] '''+''' 1 a 2,3,4-saturated fatty acyl CoA[c]
+
** 1 β-D-fructose 2,6-bisphosphate[c] '''+''' 1 H2O[c] '''=>''' 1 β-D-fructofuranose 6-phosphate[c] '''+''' 1 phosphate[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Tiso_gene_3855]]
+
* [[Tiso_gene_15398]]
−
** IN-SILICO_ANNOTATION
+
−
***EC-NUMBER
+
 
** EXPERIMENTAL_ANNOTATION
 
** EXPERIMENTAL_ANNOTATION
−
***EC-NUMBER
+
***AUTOMATED-NAME-MATCH
−
* [[Tiso_gene_17451]]
+
** [[pantograph]]-[[creinhardtii]]
−
** IN-SILICO_ANNOTATION
+
* [[Tiso_gene_2100]]
−
***EC-NUMBER
+
 
** EXPERIMENTAL_ANNOTATION
 
** EXPERIMENTAL_ANNOTATION
−
***EC-NUMBER
+
***AUTOMATED-NAME-MATCH
−
* [[Tiso_gene_3856]]
+
** [[pantograph]]-[[athaliana]]
−
** IN-SILICO_ANNOTATION
+
* [[Tiso_gene_893]]
−
***EC-NUMBER
+
** [[pantograph]]-[[athaliana]]
−
* [[Tiso_gene_15327]]
+
* [[Tiso_gene_892]]
 
** EXPERIMENTAL_ANNOTATION
 
** EXPERIMENTAL_ANNOTATION
−
***EC-NUMBER
+
***AUTOMATED-NAME-MATCH
−
* [[Tiso_gene_10116]]
+
−
** IN-SILICO_ANNOTATION
+
−
***EC-NUMBER
+
−
** EXPERIMENTAL_ANNOTATION
+
−
***EC-NUMBER
+
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY-5136]], fatty acid β-oxidation II (peroxisome): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5136 PWY-5136]
+
* [[PWY66-423]], fructose 2,6-bisphosphate biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY66-423 PWY66-423]
−
** '''5''' reactions found over '''5''' reactions in the full pathway
+
** '''2''' reactions found over '''2''' reactions in the full pathway
−
* [[FAO-PWY]], fatty acid β-oxidation I: [http://metacyc.org/META/NEW-IMAGE?object=FAO-PWY FAO-PWY]
+
−
** '''5''' reactions found over '''7''' reactions in the full pathway
+
−
* [[PWY-7288]], fatty acid β-oxidation (peroxisome, yeast): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7288 PWY-7288]
+
−
** '''3''' reactions found over '''5''' reactions in the full pathway
+
−
* [[PWY66-391]], fatty acid β-oxidation VI (peroxisome): [http://metacyc.org/META/NEW-IMAGE?object=PWY66-391 PWY66-391]
+
−
** '''5''' reactions found over '''7''' reactions in the full pathway
+
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 +
* [[orthology]]:
 +
** [[pantograph]]:
 +
*** [[creinhardtii]]
 +
*** [[athaliana]]
 
* [[annotation]]:
 
* [[annotation]]:
 
** [[pathwaytools]]:
 
** [[pathwaytools]]:
Line 57: Line 42:
 
== External links  ==
 
== External links  ==
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=21564 21564]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=17289 17289]
−
* PIR:
+
−
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=XURTAB XURTAB]
+
−
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=XURTAA XURTAA]
+
−
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=XURT XURT]
+
−
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=XUHUAB XUHUAB]
+
−
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=XUEC XUEC]
+
−
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=T52165 T52165]
+
−
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=T52110 T52110]
+
−
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=T07989 T07989]
+
−
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=S72532 S72532]
+
−
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=S57792 S57792]
+
−
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=S36838 S36838]
+
−
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=S33637 S33637]
+
−
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=S22784 S22784]
+
−
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=JS0624 JS0624]
+
−
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=H64890 H64890]
+
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R00391 R00391]
+
** [http://www.genome.jp/dbget-bin/www_bget?R00763 R00763]
 
* UNIPROT:
 
* UNIPROT:
−
** [http://www.uniprot.org/uniprot/P77525 P77525]
+
** [http://www.uniprot.org/uniprot/P26285 P26285]
−
** [http://www.uniprot.org/uniprot/P28790 P28790]
+
** [http://www.uniprot.org/uniprot/P25114 P25114]
−
** [http://www.uniprot.org/uniprot/P27796 P27796]
+
** [http://www.uniprot.org/uniprot/Q7M3I3 Q7M3I3]
−
** [http://www.uniprot.org/uniprot/Q08375 Q08375]
+
** [http://www.uniprot.org/uniprot/P49872 P49872]
−
** [http://www.uniprot.org/uniprot/Q05493 Q05493]
+
** [http://www.uniprot.org/uniprot/Q28830 Q28830]
−
** [http://www.uniprot.org/uniprot/Q42918 Q42918]
+
** [http://www.uniprot.org/uniprot/Q91348 Q91348]
−
** [http://www.uniprot.org/uniprot/Q43742 Q43742]
+
** [http://www.uniprot.org/uniprot/Q9JJH5 Q9JJH5]
−
** [http://www.uniprot.org/uniprot/Q56WD9 Q56WD9]
+
** [http://www.uniprot.org/uniprot/Q16875 Q16875]
−
** [http://www.uniprot.org/uniprot/Q570C8 Q570C8]
+
** [http://www.uniprot.org/uniprot/P07953 P07953]
−
** [http://www.uniprot.org/uniprot/P21151 P21151]
+
** [http://www.uniprot.org/uniprot/P16118 P16118]
−
** [http://www.uniprot.org/uniprot/P09110 P09110]
+
** [http://www.uniprot.org/uniprot/P32604 P32604]
−
** [http://www.uniprot.org/uniprot/P13437 P13437]
+
** [http://www.uniprot.org/uniprot/P70265 P70265]
−
** [http://www.uniprot.org/uniprot/P21775 P21775]
+
** [http://www.uniprot.org/uniprot/P70266 P70266]
−
** [http://www.uniprot.org/uniprot/P07871 P07871]
+
** [http://www.uniprot.org/uniprot/O24559 O24559]
 +
** [http://www.uniprot.org/uniprot/O81398 O81398]
 +
** [http://www.uniprot.org/uniprot/O64983 O64983]
 +
** [http://www.uniprot.org/uniprot/Q9URZ7 Q9URZ7]
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=thiolase}}
+
{{#set: ec number=EC-3.1.3.46}}
−
{{#set: common name=acetyl-_c-acetyltransferase}}
+
{{#set: gene associated=Tiso_gene_15398|Tiso_gene_2100|Tiso_gene_893|Tiso_gene_892}}
−
{{#set: common name=3-ketoacyl-_thiolase}}
+
{{#set: in pathway=PWY66-423}}
−
{{#set: ec number=EC-2.3.1.16}}
+
{{#set: reconstruction category=orthology}}
−
{{#set: common name=Beta-ketothiolase}}
+
{{#set: reconstruction tool=pantograph}}
−
{{#set: gene associated=Tiso_gene_3855|Tiso_gene_17451|Tiso_gene_3856|Tiso_gene_15327|Tiso_gene_10116}}
+
{{#set: reconstruction source=creinhardtii|athaliana}}
−
{{#set: in pathway=PWY-5136|FAO-PWY|PWY-7288|PWY66-391}}
+
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction source=experimental_annotation|in-silico_annotation}}
 
{{#set: reconstruction source=experimental_annotation|in-silico_annotation}}

Revision as of 18:36, 10 January 2018

Reaction 3.1.3.46-RXN

  • direction:
    • LEFT-TO-RIGHT
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 β-D-fructose 2,6-bisphosphate[c] + 1 H2O[c] => 1 β-D-fructofuranose 6-phosphate[c] + 1 phosphate[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY66-423, fructose 2,6-bisphosphate biosynthesis: PWY66-423
    • 2 reactions found over 2 reactions in the full pathway

Reconstruction information

External links






Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_11155&oldid=18661"