Difference between revisions of "Tiso gene 11192"

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(Created page with "Category:Gene == Gene Tiso_gene_16954 == * left end position: ** 591 * transcription direction: ** POSITIVE * right end position: ** 3917 * centisome position: ** 10.48616...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=GALACTUROISOM-RXN GALACTUROISOM-RXN] == * direction: ** REVERSIBLE * common name: ** ORF ** bh0493_...")
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[[Category:Gene]]
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[[Category:Reaction]]
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== Gene Tiso_gene_16954 ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=GALACTUROISOM-RXN GALACTUROISOM-RXN] ==
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* left end position:
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* direction:
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** 591
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** REVERSIBLE
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* transcription direction:
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* common name:
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** POSITIVE
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** ORF
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* right end position:
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** bh0493_protein
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** 3917
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* ec number:
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* centisome position:
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** [http://enzyme.expasy.org/EC/5.3.1.12 EC-5.3.1.12]
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** 10.48616   
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* Synonym(s):
 
* Synonym(s):
  
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== Reactions associated ==
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== Reaction Formula ==
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* [[1.5.1.20-RXN]]
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* With identifiers:
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** in-silico_annotation
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** 1 [[CPD-15633]][c] '''<=>''' 1 [[D-TAGATURONATE]][c]
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***ec-number
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* With common name(s):
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== Pathways associated ==
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** 1 aldehydo-D-galacturonate[c] '''<=>''' 1 D-tagaturonate[c]
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* [[PWY-2201]]
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* [[1CMET2-PWY]]
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== Genes associated with this reaction  ==
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* [[CODH-PWY]]
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Genes have been associated with this reaction based on different elements listed below.
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* [[PWY-3841]]
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* [[Tiso_gene_19097]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_8329]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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== Pathways ==
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* [[PWY-7248]], pectin degradation III: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7248 PWY-7248]
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** '''1''' reactions found over '''5''' reactions in the full pathway
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* [[GALACTUROCAT-PWY]], D-galacturonate degradation I: [http://metacyc.org/META/NEW-IMAGE?object=GALACTUROCAT-PWY GALACTUROCAT-PWY]
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** '''2''' reactions found over '''5''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[annotation]]
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** Source: [[annotation-in-silico_annotation]]
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*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
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{{#set: left end position=591}}
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* RHEA:
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{{#set: transcription direction=POSITIVE}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=27702 27702]
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{{#set: right end position=3917}}
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* LIGAND-RXN:
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{{#set: centisome position=10.48616    }}
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** [http://www.genome.jp/dbget-bin/www_bget?R01983 R01983]
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{{#set: reaction associated=1.5.1.20-RXN}}
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* UNIPROT:
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{{#set: pathway associated=PWY-2201|1CMET2-PWY|CODH-PWY|PWY-3841}}
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** [http://www.uniprot.org/uniprot/P0A8G3 P0A8G3]
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** [http://www.uniprot.org/uniprot/Q9CF53 Q9CF53]
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{{#set: direction=REVERSIBLE}}
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{{#set: common name=ORF}}
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{{#set: common name=bh0493_protein}}
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{{#set: ec number=EC-5.3.1.12}}
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{{#set: gene associated=Tiso_gene_19097|Tiso_gene_8329}}
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{{#set: in pathway=PWY-7248|GALACTUROCAT-PWY}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction source=annotation-in-silico_annotation}}
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{{#set: reconstruction tool=pathwaytools}}

Revision as of 19:32, 18 March 2018

Reaction GALACTUROISOM-RXN

  • direction:
    • REVERSIBLE
  • common name:
    • ORF
    • bh0493_protein
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 aldehydo-D-galacturonate[c] <=> 1 D-tagaturonate[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links





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