Difference between revisions of "Tiso gene 11323"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-16020 RXN-16020] == * direction: ** LEFT-TO-RIGHT * common name: ** chloroplast_beta-keto_acyl_...")
(Created page with "Category:Gene == Gene Tiso_gene_11323 == * right end position: ** 2621 * transcription direction: ** NEGATIVE * left end position: ** 158 * centisome position: ** 2.006604...")
 
(One intermediate revision by the same user not shown)
Line 1: Line 1:
−
[[Category:Reaction]]
+
[[Category:Gene]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-16020 RXN-16020] ==
+
== Gene Tiso_gene_11323 ==
−
* direction:
+
* right end position:
−
** LEFT-TO-RIGHT
+
** 2621
−
* common name:
+
* transcription direction:
−
** chloroplast_beta-keto_acyl_reductase
+
** NEGATIVE
−
* ec number:
+
* left end position:
−
** [http://enzyme.expasy.org/EC/1.1.1.330 EC-1.1.1.330]
+
** 158
 +
* centisome position:
 +
** 2.006604   
 
* Synonym(s):
 
* Synonym(s):
  
−
== Reaction Formula ==
+
== Reactions associated ==
−
* With identifiers:
+
* Reaction: [[1.2.1.27-RXN]]
−
** 1 [[NADH-P-OR-NOP]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[CPD-17262]][c] '''=>''' 1 [[CPD-17263]][c] '''+''' 1 [[NAD-P-OR-NOP]][c]
+
** Source: [[annotation-in-silico_annotation]]
−
* With common name(s):
+
*** Assignment: automated-name-match
−
** 1 NAD(P)H[c] '''+''' 1 H+[c] '''+''' 1 3-oxo-icosatetraenoyl-CoA[c] '''=>''' 1 (8Z,11Z,14Z,17Z)-3-hydroxy-icosa-8,11,14,17-tetraenoyl-CoA[c] '''+''' 1 NAD(P)+[c]
+
** Source: [[orthology-esiliculosus]]
−
 
+
* Reaction: [[RXN-11213]]
−
== Genes associated with this reaction  ==
+
** Source: [[annotation-in-silico_annotation]]
−
Genes have been associated with this reaction based on different elements listed below.
+
*** Assignment: automated-name-match
−
* [[Tiso_gene_9871]]
+
** Source: [[orthology-esiliculosus]]
−
** IN-SILICO_ANNOTATION
+
* Reaction: [[RXN-2902]]
−
***EC-NUMBER
+
−
** EXPERIMENTAL_ANNOTATION
+
−
***EC-NUMBER
+
−
== Pathways  ==
+
−
* [[PWY-7049]], icosapentaenoate biosynthesis II (6-desaturase, mammals): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7049 PWY-7049]
+
−
** '''2''' reactions found over '''7''' reactions in the full pathway
+
−
* [[PWY-6958]], icosapentaenoate biosynthesis I (lower eukaryotes): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6958 PWY-6958]
+
−
** '''2''' reactions found over '''8''' reactions in the full pathway
+
−
== Reconstruction information  ==
+
−
* Category: [[annotation]]
+
−
** Source: [[annotation-experimental_annotation]]
+
−
*** Tool: [[pathwaytools]]
+
 
** Source: [[annotation-in-silico_annotation]]
 
** Source: [[annotation-in-silico_annotation]]
−
*** Tool: [[pathwaytools]]
+
*** Assignment: automated-name-match
 +
== Pathways associated ==
 +
* [[PWY-1781]]
 +
* [[P562-PWY]]
 +
* [[BETA-ALA-DEGRADATION-I-PWY]]
 +
* [[PWY-7574]]
 +
* [[VALDEG-PWY]]
 +
* [[PWY-5642]]
 
== External links  ==
 
== External links  ==
−
{{#set: direction=LEFT-TO-RIGHT}}
+
{{#set: right end position=2621}}
−
{{#set: common name=chloroplast_beta-keto_acyl_reductase}}
+
{{#set: transcription direction=NEGATIVE}}
−
{{#set: ec number=EC-1.1.1.330}}
+
{{#set: left end position=158}}
−
{{#set: gene associated=Tiso_gene_9871}}
+
{{#set: centisome position=2.006604    }}
−
{{#set: in pathway=PWY-7049|PWY-6958}}
+
{{#set: reaction associated=1.2.1.27-RXN|RXN-11213|RXN-2902}}
−
{{#set: reconstruction category=annotation}}
+
{{#set: pathway associated=PWY-1781|P562-PWY|BETA-ALA-DEGRADATION-I-PWY|PWY-7574|VALDEG-PWY|PWY-5642}}
−
{{#set: reconstruction source=annotation-experimental_annotation|annotation-in-silico_annotation}}
+
−
{{#set: reconstruction tool=pathwaytools}}
+

Latest revision as of 20:51, 21 March 2018

Gene Tiso_gene_11323

  • right end position:
    • 2621
  • transcription direction:
    • NEGATIVE
  • left end position:
    • 158
  • centisome position:
    • 2.006604
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_11323&oldid=44229"