Difference between revisions of "Tiso gene 11351"

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(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-4381 PWY-4381] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2759 TAX-27...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-5861 RXN-5861] == * direction: ** LEFT-TO-RIGHT * common name: ** tyrosinase * Synonym(s): ==...")
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[[Category:Pathway]]
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[[Category:Reaction]]
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-4381 PWY-4381] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-5861 RXN-5861] ==
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* taxonomic range:
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* direction:
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2759 TAX-2759]
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** LEFT-TO-RIGHT
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2]
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* common name:
 
* common name:
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** fatty acid biosynthesis initiation I
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** tyrosinase
 
* Synonym(s):
 
* Synonym(s):
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** de novo fatty acid biosynthesis, initial reactions
 
  
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== Reaction(s) found ==
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== Reaction Formula ==
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'''3''' reactions found over '''3''' reactions in the full pathway
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* With identifiers:
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* [[2.3.1.180-RXN]]
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** 1 [[OXYGEN-MOLECULE]][c] '''+''' 2 [[TYR]][c] '''=>''' 2 [[L-DIHYDROXY-PHENYLALANINE]][c]
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** 1 associated gene(s):
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* With common name(s):
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*** [[Tiso_gene_15991]]
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** 1 oxygen[c] '''+''' 2 L-tyrosine[c] '''=>''' 2 L-dopa[c]
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** 2 reconstruction source(s) associated:
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*** [[annotation-in-silico_annotation]]
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== Genes associated with this reaction  ==
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*** [[annotation-experimental_annotation]]
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Genes have been associated with this reaction based on different elements listed below.
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* [[ACETYL-COA-CARBOXYLTRANSFER-RXN]]
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* Gene: [[Tiso_gene_1791]]
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** 4 associated gene(s):
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** Source: [[annotation-in-silico_annotation]]
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*** [[Tiso_gene_7965]]
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*** Assignment: AUTOMATED-NAME-MATCH
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*** [[Tiso_gene_2812]]
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== Pathways  ==
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*** [[Tiso_gene_5029]]
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* [[PWY-6955]], lincomycin biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6955 PWY-6955]
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*** [[Tiso_gene_3800]]
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** '''1''' reactions found over '''8''' reactions in the full pathway
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** 5 reconstruction source(s) associated:
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* [[PWY-6133]], (S)-reticuline biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6133 PWY-6133]
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*** [[annotation-experimental_annotation]]
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** '''2''' reactions found over '''7''' reactions in the full pathway
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*** [[orthology-athaliana]]
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* [[PWY-3581]], (S)-reticuline biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-3581 PWY-3581]
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*** [[annotation-in-silico_annotation]]
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** '''3''' reactions found over '''11''' reactions in the full pathway
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*** [[manual-primary_network]]
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* [[PWY-5399]], betacyanin biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5399 PWY-5399]
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*** [[orthology-esiliculosus]]
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** '''3''' reactions found over '''8''' reactions in the full pathway
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* [[MALONYL-COA-ACP-TRANSACYL-RXN]]
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== Reconstruction information  ==
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** 7 associated gene(s):
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* Category: [[annotation]]
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*** [[Tiso_gene_500]]
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** Source: [[annotation-in-silico_annotation]]
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*** [[Tiso_gene_10876]]
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*** Tool: [[pathwaytools]]
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*** [[Tiso_gene_136]]
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*** [[Tiso_gene_19309]]
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*** [[Tiso_gene_135]]
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*** [[Tiso_gene_18460]]
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*** [[Tiso_gene_13394]]
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** 5 reconstruction source(s) associated:
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*** [[annotation-in-silico_annotation]]
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*** [[manual-primary_network]]
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*** [[annotation-experimental_annotation]]
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*** [[orthology-synechocystis]]
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*** [[orthology-esiliculosus]]
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== Reaction(s) not found ==
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== External links  ==
 
== External links  ==
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* ECOCYC:
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* RHEA:
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** [http://metacyc.org/ECOLI/NEW-IMAGE?object=PWY-4381 PWY-4381]
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=34283 34283]
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* ARACYC:
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* LIGAND-RXN:
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** [http://metacyc.org/ARA/NEW-IMAGE?object=PWY-4381 PWY-4381]
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** [http://www.genome.jp/dbget-bin/www_bget?R00731 R00731]
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{{#set: taxonomic range=TAX-2759}}
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** [http://www.genome.jp/dbget-bin/www_bget?R00031 R00031]
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{{#set: taxonomic range=TAX-2}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=fatty acid biosynthesis initiation I}}
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{{#set: common name=tyrosinase}}
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{{#set: common name=de novo fatty acid biosynthesis, initial reactions}}
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{{#set: gene associated=Tiso_gene_1791}}
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{{#set: reaction found=3}}
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{{#set: in pathway=PWY-6955|PWY-6133|PWY-3581|PWY-5399}}
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{{#set: total reaction=3}}
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{{#set: reconstruction category=annotation}}
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{{#set: completion rate=100.0}}
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{{#set: reconstruction source=annotation-in-silico_annotation}}
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{{#set: reconstruction tool=pathwaytools}}

Revision as of 15:47, 21 March 2018

Reaction RXN-5861

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • tyrosinase
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-6955, lincomycin biosynthesis: PWY-6955
    • 1 reactions found over 8 reactions in the full pathway
  • PWY-6133, (S)-reticuline biosynthesis II: PWY-6133
    • 2 reactions found over 7 reactions in the full pathway
  • PWY-3581, (S)-reticuline biosynthesis I: PWY-3581
    • 3 reactions found over 11 reactions in the full pathway
  • PWY-5399, betacyanin biosynthesis: PWY-5399
    • 3 reactions found over 8 reactions in the full pathway

Reconstruction information

External links




Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_11351&oldid=30163"