Difference between revisions of "Tiso gene 11351"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-5861 RXN-5861] == * direction: ** LEFT-TO-RIGHT * common name: ** tyrosinase * Synonym(s): ==...")
(Created page with "Category:Gene == Gene Tiso_gene_11351 == * right end position: ** 7185 * transcription direction: ** POSITIVE * left end position: ** 6041 * centisome position: ** 76.8379...")
 
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-5861 RXN-5861] ==
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== Gene Tiso_gene_11351 ==
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* direction:
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* right end position:
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** LEFT-TO-RIGHT
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** 7185
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* common name:
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* transcription direction:
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** tyrosinase
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** POSITIVE
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* left end position:
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** 6041
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* centisome position:
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** 76.83796   
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[3.1.1.64-RXN]]
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** 1 [[OXYGEN-MOLECULE]][c] '''+''' 2 [[TYR]][c] '''=>''' 2 [[L-DIHYDROXY-PHENYLALANINE]][c]
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** Source: [[annotation-experimental_annotation]]
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* With common name(s):
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*** Assignment: automated-name-match
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** 1 oxygen[c] '''+''' 2 L-tyrosine[c] '''=>''' 2 L-dopa[c]
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* Reaction: [[CARBOXYLESTERASE-RXN]]
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** Source: [[annotation-experimental_annotation]]
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== Genes associated with this reaction  ==
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*** Assignment: automated-name-match
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Genes have been associated with this reaction based on different elements listed below.
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* Reaction: [[RETINYL-PALMITATE-ESTERASE-RXN]]
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* Gene: [[Tiso_gene_1791]]
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** Source: [[annotation-experimental_annotation]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: automated-name-match
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*** Assignment: AUTOMATED-NAME-MATCH
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* Reaction: [[RXN-10711]]
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== Pathways  ==
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** Source: [[annotation-experimental_annotation]]
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* [[PWY-6955]], lincomycin biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6955 PWY-6955]
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*** Assignment: automated-name-match
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** '''1''' reactions found over '''8''' reactions in the full pathway
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* Reaction: [[RXN-10767]]
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* [[PWY-6133]], (S)-reticuline biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6133 PWY-6133]
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** Source: [[annotation-experimental_annotation]]
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** '''2''' reactions found over '''7''' reactions in the full pathway
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*** Assignment: automated-name-match
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* [[PWY-3581]], (S)-reticuline biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-3581 PWY-3581]
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* Reaction: [[RXN-12252]]
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** '''3''' reactions found over '''11''' reactions in the full pathway
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** Source: [[annotation-experimental_annotation]]
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* [[PWY-5399]], betacyanin biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5399 PWY-5399]
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*** Assignment: automated-name-match
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** '''3''' reactions found over '''8''' reactions in the full pathway
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* Reaction: [[RXN-12575]]
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== Reconstruction information  ==
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** Source: [[annotation-experimental_annotation]]
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* Category: [[annotation]]
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*** Assignment: automated-name-match
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** Source: [[annotation-in-silico_annotation]]
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* Reaction: [[RXNQT-4366]]
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*** Tool: [[pathwaytools]]
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** Source: [[annotation-experimental_annotation]]
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*** Assignment: automated-name-match
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== Pathways associated ==
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* [[PWY-6857]]
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* [[PWY-6303]]
 
== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: right end position=7185}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=34283 34283]
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{{#set: transcription direction=POSITIVE}}
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* LIGAND-RXN:
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{{#set: left end position=6041}}
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** [http://www.genome.jp/dbget-bin/www_bget?R00731 R00731]
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{{#set: centisome position=76.83796    }}
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** [http://www.genome.jp/dbget-bin/www_bget?R00031 R00031]
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{{#set: reaction associated=3.1.1.64-RXN|CARBOXYLESTERASE-RXN|RETINYL-PALMITATE-ESTERASE-RXN|RXN-10711|RXN-10767|RXN-12252|RXN-12575|RXNQT-4366}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: pathway associated=PWY-6857|PWY-6303}}
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{{#set: common name=tyrosinase}}
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{{#set: gene associated=Tiso_gene_1791}}
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{{#set: in pathway=PWY-6955|PWY-6133|PWY-3581|PWY-5399}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction source=annotation-in-silico_annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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Latest revision as of 20:08, 21 March 2018

Gene Tiso_gene_11351

  • right end position:
    • 7185
  • transcription direction:
    • POSITIVE
  • left end position:
    • 6041
  • centisome position:
    • 76.83796
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_11351&oldid=39678"