Difference between revisions of "Tiso gene 11407"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-5467 RXN-5467] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/2....")
(Created page with "Category:Gene == Gene Tiso_gene_9325 == * left end position: ** 2353 * transcription direction: ** POSITIVE * right end position: ** 4912 * centisome position: ** 24.97611...")
Line 1: Line 1:
−
[[Category:Reaction]]
+
[[Category:Gene]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-5467 RXN-5467] ==
+
== Gene Tiso_gene_9325 ==
−
* direction:
+
* left end position:
−
** LEFT-TO-RIGHT
+
** 2353
−
* ec number:
+
* transcription direction:
−
** [http://enzyme.expasy.org/EC/2.4.1.259 EC-2.4.1.259]
+
** POSITIVE
 +
* right end position:
 +
** 4912
 +
* centisome position:
 +
** 24.976118   
 
* Synonym(s):
 
* Synonym(s):
  
−
== Reaction Formula ==
+
== Reactions associated ==
−
* With identifiers:
+
* [[R468-RXN]]
−
** 1 [[CPD-5165]][c] '''+''' 1 [[CPD-171]][c] '''=>''' 1 [[DOLICHOLP]][c] '''+''' 1 [[CPD-5166]][c] '''+''' 1 [[PROTON]][c]
+
** in-silico_annotation
−
* With common name(s):
+
***ec-number
−
** 1 α-D-Man-(1→2)-α-D-Man-(1→2)-α-D-Man-(1→3)-[α-D-Man-(1→3)-α-D-Man-(1→6)]-β-D-Man-(1→4)-β-D-GlcNAc-(1→4)-α-D-GlcNAc-diphosphodolichol[c] '''+''' 1 a dolichyl β-D-mannosyl phosphate[c] '''=>''' 1 a dolichyl phosphate[c] '''+''' 1 α-D-Man-(1→2)-α-D-Man-(1→2)-α-D-Man-(1→3)-[α-D-Man-(1→2)-α-D-Man-(1→3)-α-D-Man-(1→6)]-β-D-Man-(1→4)-β-D-GlcNAc-(1→4)-α-D-GlcNAc-diphosphodolichol[c] '''+''' 1 H+[c]
+
** experimental_annotation
−
 
+
***ec-number
−
== Genes associated with this reaction  ==
+
== Pathways associated ==
−
Genes have been associated with this reaction based on different elements listed below.
+
* [[PWY-5169]]
−
* [[Tiso_gene_8232]]
+
−
** [[pantograph]]-[[esiliculosus]]
+
−
== Pathways  ==
+
−
* [[MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS]], protein N-glycosylation (eukaryotic, high mannose): [http://metacyc.org/META/NEW-IMAGE?object=MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS]
+
−
** '''19''' reactions found over '''19''' reactions in the full pathway
+
−
== Reconstruction information  ==
+
−
* [[orthology]]:
+
−
** [[pantograph]]:
+
−
*** [[esiliculosus]]
+
−
* [[annotation]]:
+
−
** [[pathwaytools]]:
+
−
*** [[in-silico_annotation]]
+
 
== External links  ==
 
== External links  ==
−
* RHEA:
+
{{#set: left end position=2353}}
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=29534 29534]
+
{{#set: transcription direction=POSITIVE}}
−
* LIGAND-RXN:
+
{{#set: right end position=4912}}
−
** [http://www.genome.jp/dbget-bin/www_bget?R06259 R06259]
+
{{#set: centisome position=24.976118    }}
−
{{#set: direction=LEFT-TO-RIGHT}}
+
{{#set: reaction associated=R468-RXN}}
−
{{#set: ec number=EC-2.4.1.259}}
+
{{#set: pathway associated=PWY-5169}}
−
{{#set: gene associated=Tiso_gene_8232}}
+
−
{{#set: in pathway=MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS}}
+
−
{{#set: reconstruction category=orthology}}
+
−
{{#set: reconstruction tool=pantograph}}
+
−
{{#set: reconstruction source=esiliculosus}}
+
−
{{#set: reconstruction category=annotation}}
+
−
{{#set: reconstruction tool=pathwaytools}}
+
−
{{#set: reconstruction source=in-silico_annotation}}
+

Revision as of 19:26, 18 March 2018

Gene Tiso_gene_9325

  • left end position:
    • 2353
  • transcription direction:
    • POSITIVE
  • right end position:
    • 4912
  • centisome position:
    • 24.976118
  • Synonym(s):

Reactions associated

  • R468-RXN
    • in-silico_annotation
      • ec-number
    • experimental_annotation
      • ec-number

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_11407&oldid=24423"