Difference between revisions of "Tiso gene 11559"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=3-HYDROXYISOBUTYRYL-COA-HYDROLASE-RXN 3-HYDROXYISOBUTYRYL-COA-HYDROLASE-RXN] == * direction: ** LEF...")
 
(Created page with "Category:Gene == Gene Tiso_gene_11559 == * right end position: ** 3431 * transcription direction: ** POSITIVE * left end position: ** 331 * centisome position: ** 4.291455...")
 
(3 intermediate revisions by the same user not shown)
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=3-HYDROXYISOBUTYRYL-COA-HYDROLASE-RXN 3-HYDROXYISOBUTYRYL-COA-HYDROLASE-RXN] ==
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== Gene Tiso_gene_11559 ==
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* direction:
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* right end position:
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** LEFT-TO-RIGHT
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** 3431
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* common name:
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* transcription direction:
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** enoyl-_hydratase
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** POSITIVE
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* ec number:
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* left end position:
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** [http://enzyme.expasy.org/EC/3.1.2.4 EC-3.1.2.4]
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** 331
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* centisome position:
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** 4.2914557   
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[1TRANSKETO-RXN]]
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** 1 [[WATER]][c] '''+''' 1 [[CPD-12173]][c] '''=>''' 1 [[CO-A]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[CPD-12175]][c]
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** Source: [[annotation-experimental_annotation]]
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* With common name(s):
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*** Assignment: ec-number
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** 1 H2O[c] '''+''' 1 (S)-3-hydroxy-isobutanoyl-CoA[c] '''=>''' 1 coenzyme A[c] '''+''' 1 H+[c] '''+''' 1 (S)-3-hydroxy-isobutanoate[c]
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* Reaction: [[2TRANSKETO-RXN]]
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** Source: [[annotation-experimental_annotation]]
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== Genes associated with this reaction  ==
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*** Assignment: ec-number
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Genes have been associated with this reaction based on different elements listed below.
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== Pathways associated ==
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* [[Tiso_gene_2224]]
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* [[PWY-6901]]
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** IN-SILICO_ANNOTATION
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* [[P124-PWY]]
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***EC-NUMBER
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* [[CALVIN-PWY]]
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** EXPERIMENTAL_ANNOTATION
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* [[P21-PWY]]
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***EC-NUMBER
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* [[PWY-5723]]
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** [[pantograph]]-[[creinhardtii]]
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* [[PWY-1861]]
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== Pathways ==
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* [[P185-PWY]]
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* [[VALDEG-PWY]], L-valine degradation I: [http://metacyc.org/META/NEW-IMAGE?object=VALDEG-PWY VALDEG-PWY]
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* [[NONOXIPENT-PWY]]
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** '''8''' reactions found over '''8''' reactions in the full pathway
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== Reconstruction information  ==
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* [[orthology]]:
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** [[pantograph]]:
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*** [[creinhardtii]]
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* [[annotation]]:
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** [[pathwaytools]]:
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*** [[experimental_annotation]]
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*** [[in-silico_annotation]]
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== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: right end position=3431}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=20888 20888]
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{{#set: transcription direction=POSITIVE}}
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* LIGAND-RXN:
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{{#set: left end position=331}}
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** [http://www.genome.jp/dbget-bin/www_bget?R03352 R03352]
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{{#set: centisome position=4.2914557    }}
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** [http://www.genome.jp/dbget-bin/www_bget?R05064 R05064]
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{{#set: reaction associated=1TRANSKETO-RXN|2TRANSKETO-RXN}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: pathway associated=PWY-6901|P124-PWY|CALVIN-PWY|P21-PWY|PWY-5723|PWY-1861|P185-PWY|NONOXIPENT-PWY}}
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{{#set: common name=enoyl-_hydratase}}
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{{#set: ec number=EC-3.1.2.4}}
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{{#set: gene associated=Tiso_gene_2224}}
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{{#set: in pathway=VALDEG-PWY}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction tool=pantograph}}
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{{#set: reconstruction source=creinhardtii}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction source=experimental_annotation|in-silico_annotation}}
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Latest revision as of 21:21, 21 March 2018

Gene Tiso_gene_11559

  • right end position:
    • 3431
  • transcription direction:
    • POSITIVE
  • left end position:
    • 331
  • centisome position:
    • 4.2914557
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_11559&oldid=48003"