Difference between revisions of "Tiso gene 11793"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=CHORISMATE-SYNTHASE-RXN CHORISMATE-SYNTHASE-RXN] == * direction: ** LEFT-TO-RIGHT * common name: **...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=ASPDECARBOX-RXN ASPDECARBOX-RXN] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.ex...")
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=CHORISMATE-SYNTHASE-RXN CHORISMATE-SYNTHASE-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=ASPDECARBOX-RXN ASPDECARBOX-RXN] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
−
* common name:
 
−
** chorismate_synthase
 
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/4.2.3.5 EC-4.2.3.5]
+
** [http://enzyme.expasy.org/EC/4.1.1.11 EC-4.1.1.11]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[3-ENOLPYRUVYL-SHIKIMATE-5P]][c] '''=>''' 1 [[CHORISMATE]][c] '''+''' 1 [[Pi]][c]
+
** 1 [[L-ASPARTATE]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[B-ALANINE]][c] '''+''' 1 [[CARBON-DIOXIDE]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 5-enolpyruvoyl-shikimate 3-phosphate[c] '''=>''' 1 chorismate[c] '''+''' 1 phosphate[c]
+
** 1 L-aspartate[c] '''+''' 1 H+[c] '''=>''' 1 β-alanine[c] '''+''' 1 CO2[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Tiso_gene_9630]]
+
* Gene: [[Tiso_gene_9927]]
−
** IN-SILICO_ANNOTATION
+
** Source: [[orthology-synechocystis]]
−
***EC-NUMBER
+
−
** EXPERIMENTAL_ANNOTATION
+
−
***EC-NUMBER
+
−
** [[pantograph]]-[[athaliana]]
+
−
** [[pantograph]]-[[synechocystis]]
+
−
** [[pantograph]]-[[esiliculosus]]
+
−
** [[pantograph]]-[[creinhardtii]]
+
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY-6163]], chorismate biosynthesis from 3-dehydroquinate: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6163 PWY-6163]
+
* [[PWY-5155]], β-alanine biosynthesis III: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5155 PWY-5155]
−
** '''6''' reactions found over '''6''' reactions in the full pathway
+
** '''1''' reactions found over '''1''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* Category: [[orthology]]
 
* Category: [[orthology]]
−
** Source: [[orthology-athaliana]]
 
−
*** Tool: [[pantograph]]
 
−
** Source: [[orthology-creinhardtii]]
 
−
*** Tool: [[pantograph]]
 
 
** Source: [[orthology-synechocystis]]
 
** Source: [[orthology-synechocystis]]
 
*** Tool: [[pantograph]]
 
*** Tool: [[pantograph]]
−
** Source: [[orthology-esiliculosus]]
 
−
*** Tool: [[pantograph]]
 
−
* Category: [[manual]]
 
−
** Source: [[manual-primary_network]]
 
−
* Category: [[annotation]]
 
−
** Source: [[annotation-in-silico_annotation]]
 
−
*** Tool: [[pathwaytools]]
 
−
** Source: [[annotation-experimental_annotation]]
 
−
*** Tool: [[pathwaytools]]
 
 
== External links  ==
 
== External links  ==
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=21020 21020]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=19497 19497]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R01714 R01714]
+
** [http://www.genome.jp/dbget-bin/www_bget?R00489 R00489]
 
* UNIPROT:
 
* UNIPROT:
−
** [http://www.uniprot.org/uniprot/P27793 P27793]
+
** [http://www.uniprot.org/uniprot/P52999 P52999]
−
** [http://www.uniprot.org/uniprot/P23353 P23353]
+
** [http://www.uniprot.org/uniprot/O66773 O66773]
−
** [http://www.uniprot.org/uniprot/Q9JT81 Q9JT81]
+
** [http://www.uniprot.org/uniprot/Q9JZ56 Q9JZ56]
−
** [http://www.uniprot.org/uniprot/Q58575 Q58575]
+
** [http://www.uniprot.org/uniprot/P56065 P56065]
−
** [http://www.uniprot.org/uniprot/P43875 P43875]
+
** [http://www.uniprot.org/uniprot/P65660 P65660]
−
** [http://www.uniprot.org/uniprot/Q9PM41 Q9PM41]
+
** [http://www.uniprot.org/uniprot/P0A790 P0A790]
−
** [http://www.uniprot.org/uniprot/Q9CET2 Q9CET2]
+
** [http://www.uniprot.org/uniprot/Q9X037 Q9X037]
−
** [http://www.uniprot.org/uniprot/P28777 P28777]
+
** [http://www.uniprot.org/uniprot/Q9ZN30 Q9ZN30]
−
** [http://www.uniprot.org/uniprot/Q42885 Q42885]
+
** [http://www.uniprot.org/uniprot/Q9PIK3 Q9PIK3]
−
** [http://www.uniprot.org/uniprot/Q42884 Q42884]
+
** [http://www.uniprot.org/uniprot/Q9JU49 Q9JU49]
−
** [http://www.uniprot.org/uniprot/P16280 P16280]
+
** [http://www.uniprot.org/uniprot/Q9RWF1 Q9RWF1]
−
** [http://www.uniprot.org/uniprot/P12008 P12008]
+
** [http://www.uniprot.org/uniprot/Q55382 Q55382]
−
** [http://www.uniprot.org/uniprot/O74413 O74413]
+
−
** [http://www.uniprot.org/uniprot/Q12640 Q12640]
+
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=chorismate_synthase}}
+
{{#set: ec number=EC-4.1.1.11}}
−
{{#set: ec number=EC-4.2.3.5}}
+
{{#set: gene associated=Tiso_gene_9927}}
−
{{#set: gene associated=Tiso_gene_9630}}
+
{{#set: in pathway=PWY-5155}}
−
{{#set: in pathway=PWY-6163}}
+
{{#set: reconstruction category=orthology}}
−
{{#set: reconstruction category=orthology|manual|annotation}}
+
{{#set: reconstruction source=orthology-synechocystis}}
−
{{#set: reconstruction source=annotation-experimental_annotation|orthology-esiliculosus|annotation-in-silico_annotation|orthology-athaliana|orthology-synechocystis|manual-primary_network|orthology-creinhardtii}}
+
{{#set: reconstruction tool=pantograph}}
−
{{#set: reconstruction tool=pantograph|pathwaytools}}
+

Revision as of 17:00, 21 March 2018

Reaction ASPDECARBOX-RXN

  • direction:
    • LEFT-TO-RIGHT
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-5155, β-alanine biosynthesis III: PWY-5155
    • 1 reactions found over 1 reactions in the full pathway

Reconstruction information

External links




Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_11793&oldid=38006"