Difference between revisions of "Tiso gene 12647"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=4.2.99.18-RXN 4.2.99.18-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** formamidopyrimidine...")
(Created page with "Category:Gene == Gene Tiso_gene_1037 == * left end position: ** 21161 * transcription direction: ** POSITIVE * right end position: ** 26368 * centisome position: ** 79.780...")
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=4.2.99.18-RXN 4.2.99.18-RXN] ==
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== Gene Tiso_gene_1037 ==
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* direction:
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* left end position:
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** LEFT-TO-RIGHT
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** 21161
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* common name:
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* transcription direction:
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** formamidopyrimidine-dna_glycosylase
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** POSITIVE
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** endonuclease_iii
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* right end position:
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** dna-(apurinic_or_apyrimidinic_site)_lyase
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** 26368
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* ec number:
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* centisome position:
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** [http://enzyme.expasy.org/EC/4.2.99.18 EC-4.2.99.18]
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** 79.78058   
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* [[DNA-DIRECTED-RNA-POLYMERASE-RXN]]
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** 1 [[DNA-containing-abasic-Sites]][c] '''=>''' 1 [[PROTON]][c] '''+''' 1 [[3-terminal-unsaturated-sugars]][c] '''+''' 1 [[5-Phospho-terminated-DNAs]][c]
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** in-silico_annotation
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* With common name(s):
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***ec-number
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** 1 a DNA containing an apurinic/apyrimidinic site[c] '''=>''' 1 H+[c] '''+''' 1 a 3'-terminal unsaturated sugar[c] '''+''' 1 a 5'-phospho-[DNA][c]
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== Pathways associated ==
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[Tiso_gene_6558]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_14609]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_1280]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_5102]]
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** IN-SILICO_ANNOTATION
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***AUTOMATED-NAME-MATCH
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* [[Tiso_gene_17380]]
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** IN-SILICO_ANNOTATION
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***AUTOMATED-NAME-MATCH
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** EXPERIMENTAL_ANNOTATION
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***AUTOMATED-NAME-MATCH
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== Pathways ==
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== Reconstruction information  ==
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* [[orthology]]:
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** [[pantograph]]:
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*** [[esiliculosus]]
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* [[annotation]]:
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** [[pathwaytools]]:
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*** [[experimental_annotation]]
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*** [[in-silico_annotation]]
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== External links  ==
 
== External links  ==
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* UNIPROT:
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{{#set: left end position=21161}}
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** [http://www.uniprot.org/uniprot/P0AB83 P0AB83]
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{{#set: transcription direction=POSITIVE}}
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** [http://www.uniprot.org/uniprot/P28352 P28352]
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{{#set: right end position=26368}}
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** [http://www.uniprot.org/uniprot/Q58829 Q58829]
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{{#set: centisome position=79.78058    }}
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** [http://www.uniprot.org/uniprot/Q9PHS1 Q9PHS1]
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{{#set: reaction associated=DNA-DIRECTED-RNA-POLYMERASE-RXN}}
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** [http://www.uniprot.org/uniprot/Q9JVT0 Q9JVT0]
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** [http://www.uniprot.org/uniprot/Q9PNL1 Q9PNL1]
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** [http://www.uniprot.org/uniprot/P44319 P44319]
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** [http://www.uniprot.org/uniprot/Q9CGM5 Q9CGM5]
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** [http://www.uniprot.org/uniprot/P04418 P04418]
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** [http://www.uniprot.org/uniprot/P27695 P27695]
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** [http://www.uniprot.org/uniprot/P23196 P23196]
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** [http://www.uniprot.org/uniprot/P22936 P22936]
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** [http://www.uniprot.org/uniprot/P43138 P43138]
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** [http://www.uniprot.org/uniprot/P95945 P95945]
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** [http://www.uniprot.org/uniprot/P50525 P50525]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=formamidopyrimidine-dna_glycosylase}}
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{{#set: common name=endonuclease_iii}}
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{{#set: common name=dna-(apurinic_or_apyrimidinic_site)_lyase}}
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{{#set: ec number=EC-4.2.99.18}}
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{{#set: gene associated=Tiso_gene_6558|Tiso_gene_14609|Tiso_gene_1280|Tiso_gene_5102|Tiso_gene_17380}}
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{{#set: in pathway=}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction tool=pantograph}}
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{{#set: reconstruction source=esiliculosus}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction source=experimental_annotation|in-silico_annotation}}
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Revision as of 01:09, 19 March 2018

Gene Tiso_gene_1037

  • left end position:
    • 21161
  • transcription direction:
    • POSITIVE
  • right end position:
    • 26368
  • centisome position:
    • 79.78058
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_12647&oldid=28968"