Difference between revisions of "Tiso gene 12686"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=2.7.7.8-RXN 2.7.7.8-RXN] == * direction: ** REVERSIBLE * common name: ** polynucleotide_phosphoryla...")
(Created page with "Category:Gene == Gene Tiso_gene_12686 == * right end position: ** 6777 * transcription direction: ** NEGATIVE * left end position: ** 4173 * centisome position: ** 61.5577...")
 
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=2.7.7.8-RXN 2.7.7.8-RXN] ==
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== Gene Tiso_gene_12686 ==
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* direction:
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* right end position:
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** REVERSIBLE
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** 6777
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* common name:
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* transcription direction:
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** polynucleotide_phosphorylase_polyadenylase
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** NEGATIVE
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* ec number:
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* left end position:
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** [http://enzyme.expasy.org/EC/2.7.7.8 EC-2.7.7.8]
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** 4173
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* centisome position:
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** 61.55775   
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[3.1.1.64-RXN]]
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** 1 [[ssRNAs]][c] '''+''' 1 [[Pi]][c] '''<=>''' 1 [[Nucleoside-Diphosphates]][c] '''+''' 1 [[ssRNAs]][c]
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** Source: [[annotation-in-silico_annotation]]
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* With common name(s):
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*** Assignment: ec-number
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** 1 a single-stranded RNA[c] '''+''' 1 phosphate[c] '''<=>''' 1 a nucleoside diphosphate[c] '''+''' 1 a single-stranded RNA[c]
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* Reaction: [[CARBOXYLESTERASE-RXN]]
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** Source: [[annotation-in-silico_annotation]]
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== Genes associated with this reaction  ==
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*** Assignment: ec-number
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Genes have been associated with this reaction based on different elements listed below.
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* Reaction: [[RETINYL-PALMITATE-ESTERASE-RXN]]
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* Gene: [[Tiso_gene_2987]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: ec-number
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* Reaction: [[RXN-10711]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: ec-number
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* Reaction: [[RXN-10767]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: ec-number
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* Reaction: [[RXN-12252]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: ec-number
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* Reaction: [[RXN-12575]]
 
** Source: [[annotation-in-silico_annotation]]
 
** Source: [[annotation-in-silico_annotation]]
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*** Assignment: AUTOMATED-NAME-MATCH
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*** Assignment: ec-number
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** Source: [[annotation-experimental_annotation]]
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* Reaction: [[RXNQT-4366]]
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*** Assignment: AUTOMATED-NAME-MATCH
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** Source: [[orthology-esiliculosus]]
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== Pathways  ==
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-esiliculosus]]
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*** Tool: [[pantograph]]
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* Category: [[annotation]]
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** Source: [[annotation-experimental_annotation]]
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*** Tool: [[pathwaytools]]
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** Source: [[annotation-in-silico_annotation]]
 
** Source: [[annotation-in-silico_annotation]]
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*** Tool: [[pathwaytools]]
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*** Assignment: ec-number
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== Pathways associated ==
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* [[PWY-6857]]
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* [[PWY-6303]]
 
== External links  ==
 
== External links  ==
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* LIGAND-RXN:
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{{#set: right end position=6777}}
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** [http://www.genome.jp/dbget-bin/www_bget?R07282 R07282]
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{{#set: transcription direction=NEGATIVE}}
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* UNIPROT:
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{{#set: left end position=4173}}
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** [http://www.uniprot.org/uniprot/P44584 P44584]
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{{#set: centisome position=61.55775    }}
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** [http://www.uniprot.org/uniprot/Q9PN44 Q9PN44]
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{{#set: reaction associated=3.1.1.64-RXN|CARBOXYLESTERASE-RXN|RETINYL-PALMITATE-ESTERASE-RXN|RXN-10711|RXN-10767|RXN-12252|RXN-12575|RXNQT-4366}}
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** [http://www.uniprot.org/uniprot/P05055 P05055]
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{{#set: pathway associated=PWY-6857|PWY-6303}}
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** [http://www.uniprot.org/uniprot/Q9JV72 Q9JV72]
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** [http://www.uniprot.org/uniprot/P41121 P41121]
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** [http://www.uniprot.org/uniprot/P50849 P50849]
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** [http://www.uniprot.org/uniprot/P72659 P72659]
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** [http://www.uniprot.org/uniprot/O24288 O24288]
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** [http://www.uniprot.org/uniprot/Q8CJQ6 Q8CJQ6]
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** [http://www.uniprot.org/uniprot/O32966 O32966]
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{{#set: direction=REVERSIBLE}}
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{{#set: common name=polynucleotide_phosphorylase_polyadenylase}}
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{{#set: ec number=EC-2.7.7.8}}
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{{#set: gene associated=Tiso_gene_2987}}
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{{#set: in pathway=}}
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{{#set: reconstruction category=orthology|annotation}}
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{{#set: reconstruction source=annotation-experimental_annotation|annotation-in-silico_annotation|orthology-esiliculosus}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}
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Latest revision as of 21:23, 21 March 2018

Gene Tiso_gene_12686

  • right end position:
    • 6777
  • transcription direction:
    • NEGATIVE
  • left end position:
    • 4173
  • centisome position:
    • 61.55775
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_12686&oldid=48346"