Difference between revisions of "Tiso gene 12889"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=3.5.1.88-RXN 3.5.1.88-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** polypeptide_deformyla...")
(Created page with "Category:Gene == Gene Tiso_gene_12889 == * right end position: ** 3613 * transcription direction: ** POSITIVE * left end position: ** 1011 * centisome position: ** 15.1870...")
 
Line 1: Line 1:
−
[[Category:Reaction]]
+
[[Category:Gene]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=3.5.1.88-RXN 3.5.1.88-RXN] ==
+
== Gene Tiso_gene_12889 ==
−
* direction:
+
* right end position:
−
** LEFT-TO-RIGHT
+
** 3613
−
* common name:
+
* transcription direction:
−
** polypeptide_deformylase
+
** POSITIVE
−
* ec number:
+
* left end position:
−
** [http://enzyme.expasy.org/EC/3.5.1.88 EC-3.5.1.88]
+
** 1011
 +
* centisome position:
 +
** 15.18702   
 
* Synonym(s):
 
* Synonym(s):
  
−
== Reaction Formula ==
+
== Reactions associated ==
−
* With identifiers:
+
* Reaction: [[ASPAMINOTRANS-RXN]]
−
** 1 [[FORMYL-L-METHIONYL-PEPTIDE]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[FORMATE]][c] '''+''' 1 [[METHIONYL-PEPTIDE]][c]
+
** Source: [[annotation-in-silico_annotation]]
−
* With common name(s):
+
*** Assignment: automated-name-match
−
** 1 a [protein] N-terminal-formyl-L-methionine[c] '''+''' 1 H2O[c] '''=>''' 1 formate[c] '''+''' 1 an N-terminal L-methionyl-[protein][c]
+
* Reaction: [[RXN-10814]]
−
 
+
** Source: [[annotation-in-silico_annotation]]
−
== Genes associated with this reaction  ==
+
*** Assignment: automated-name-match
−
Genes have been associated with this reaction based on different elements listed below.
+
* Reaction: [[RXN-11737]]
−
* Gene: [[Tiso_gene_14998]]
+
 
** Source: [[annotation-in-silico_annotation]]
 
** Source: [[annotation-in-silico_annotation]]
−
*** Assignment: EC-NUMBER
+
*** Assignment: automated-name-match
−
== Pathways  ==
+
* Reaction: [[RXN-13697]]
−
== Reconstruction information  ==
+
−
* Category: [[annotation]]
+
 
** Source: [[annotation-in-silico_annotation]]
 
** Source: [[annotation-in-silico_annotation]]
−
*** Tool: [[pathwaytools]]
+
*** Assignment: automated-name-match
 +
== Pathways associated ==
 +
* [[PWY-5913]]
 +
* [[PWY-6318]]
 +
* [[PWY-7383]]
 +
* [[ASPARTATE-DEG1-PWY]]
 +
* [[PWY-6643]]
 +
* [[PWY-6642]]
 +
* [[PWY-6638]]
 +
* [[ASPARTATESYN-PWY]]
 +
* [[PWY-7117]]
 +
* [[GLUTDEG-PWY]]
 +
* [[PWY-7115]]
 +
* [[MALATE-ASPARTATE-SHUTTLE-PWY]]
 +
* [[ASPARAGINE-DEG1-PWY-1]]
 
== External links  ==
 
== External links  ==
−
* LIGAND-RXN:
+
{{#set: right end position=3613}}
−
** [http://www.genome.jp/dbget-bin/www_bget?R05635 R05635]
+
{{#set: transcription direction=POSITIVE}}
−
{{#set: direction=LEFT-TO-RIGHT}}
+
{{#set: left end position=1011}}
−
{{#set: common name=polypeptide_deformylase}}
+
{{#set: centisome position=15.18702    }}
−
{{#set: ec number=EC-3.5.1.88}}
+
{{#set: reaction associated=ASPAMINOTRANS-RXN|RXN-10814|RXN-11737|RXN-13697}}
−
{{#set: gene associated=Tiso_gene_14998}}
+
{{#set: pathway associated=PWY-5913|PWY-6318|PWY-7383|ASPARTATE-DEG1-PWY|PWY-6643|PWY-6642|PWY-6638|ASPARTATESYN-PWY|PWY-7117|GLUTDEG-PWY|PWY-7115|MALATE-ASPARTATE-SHUTTLE-PWY|ASPARAGINE-DEG1-PWY-1}}
−
{{#set: in pathway=}}
+
−
{{#set: reconstruction category=annotation}}
+
−
{{#set: reconstruction source=annotation-in-silico_annotation}}
+
−
{{#set: reconstruction tool=pathwaytools}}
+

Latest revision as of 20:33, 21 March 2018

Gene Tiso_gene_12889

  • right end position:
    • 3613
  • transcription direction:
    • POSITIVE
  • left end position:
    • 1011
  • centisome position:
    • 15.18702
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_12889&oldid=42358"