Difference between revisions of "Tiso gene 12990"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=1.14.11.18-RXN 1.14.11.18-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** protein_involved_...")
(Created page with "Category:Gene == Gene Tiso_gene_12990 == * right end position: ** 9527 * transcription direction: ** POSITIVE * left end position: ** 6620 * centisome position: ** 63.1137...")
 
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=1.14.11.18-RXN 1.14.11.18-RXN] ==
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== Gene Tiso_gene_12990 ==
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* direction:
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* right end position:
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** LEFT-TO-RIGHT
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** 9527
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* common name:
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* transcription direction:
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** protein_involved_in_biosynthesis_of_mitomycin_antibiotics_polyketide_fumonisin
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** POSITIVE
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* ec number:
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* left end position:
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** [http://enzyme.expasy.org/EC/1.14.11.18 EC-1.14.11.18]
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** 6620
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* centisome position:
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** 63.11374   
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[2.1.1.63-RXN]]
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** 1 [[OXYGEN-MOLECULE]][c] '''+''' 1 [[2-KETOGLUTARATE]][c] '''+''' 1 [[CPD-206]][c] '''=>''' 1 [[SUC]][c] '''+''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[2-HYDROXYPHYTANOYL-COA]][c]
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* With common name(s):
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** 1 oxygen[c] '''+''' 1 2-oxoglutarate[c] '''+''' 1 phytanoyl-CoA[c] '''=>''' 1 succinate[c] '''+''' 1 CO2[c] '''+''' 1 2-hydroxyphytanoyl-CoA[c]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* Gene: [[Tiso_gene_561]]
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** Source: [[orthology-esiliculosus]]
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* Gene: [[Tiso_gene_16200]]
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** Source: [[orthology-esiliculosus]]
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* Gene: [[Tiso_gene_14450]]
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** Source: [[orthology-esiliculosus]]
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* Gene: [[Tiso_gene_13319]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: EC-NUMBER
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* Gene: [[Tiso_gene_14707]]
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** Source: [[orthology-esiliculosus]]
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== Pathways  ==
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-esiliculosus]]
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*** Tool: [[pantograph]]
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* Category: [[annotation]]
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** Source: [[annotation-in-silico_annotation]]
 
** Source: [[annotation-in-silico_annotation]]
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*** Tool: [[pathwaytools]]
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*** Assignment: ec-number
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== Pathways associated ==
 
== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: right end position=9527}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=16065 16065]
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{{#set: transcription direction=POSITIVE}}
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* LIGAND-RXN:
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{{#set: left end position=6620}}
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** [http://www.genome.jp/dbget-bin/www_bget?R05722 R05722]
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{{#set: centisome position=63.11374    }}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: reaction associated=2.1.1.63-RXN}}
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{{#set: common name=protein_involved_in_biosynthesis_of_mitomycin_antibiotics_polyketide_fumonisin}}
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{{#set: ec number=EC-1.14.11.18}}
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{{#set: gene associated=Tiso_gene_561|Tiso_gene_16200|Tiso_gene_14450|Tiso_gene_13319|Tiso_gene_14707}}
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{{#set: in pathway=}}
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{{#set: reconstruction category=orthology|annotation}}
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{{#set: reconstruction source=annotation-in-silico_annotation|orthology-esiliculosus}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}
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Latest revision as of 20:19, 21 March 2018

Gene Tiso_gene_12990

  • right end position:
    • 9527
  • transcription direction:
    • POSITIVE
  • left end position:
    • 6620
  • centisome position:
    • 63.11374
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_12990&oldid=40873"