Difference between revisions of "Tiso gene 13007"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-10 RXN-10] == * direction: ** LEFT-TO-RIGHT * common name: ** argininosuccinate_synthase * ec n...")
(Created page with "Category:Gene == Gene Tiso_gene_13007 == * right end position: ** 5505 * transcription direction: ** POSITIVE * left end position: ** 1946 * centisome position: ** 29.5744...")
 
(2 intermediate revisions by the same user not shown)
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-10 RXN-10] ==
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== Gene Tiso_gene_13007 ==
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* direction:
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* right end position:
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** LEFT-TO-RIGHT
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** 5505
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* common name:
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* transcription direction:
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** argininosuccinate_synthase
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** POSITIVE
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* ec number:
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* left end position:
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** [http://enzyme.expasy.org/EC/6.3.4.5 EC-6.3.4.5]
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** 1946
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* centisome position:
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** 29.574469   
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[ACONITATEDEHYDR-RXN]]
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** 1 [[L-ASPARTATE]][c] '''+''' 1 [[ATP]][c] '''+''' 1 [[O-UREIDOHOMOSERINE]][c] '''=>''' 1 [[AMP]][c] '''+''' 1 [[PPI]][c] '''+''' 1 [[CANAVANINOSUCCINATE]][c] '''+''' 1 [[PROTON]][c]
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** Source: [[annotation-experimental_annotation]]
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* With common name(s):
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*** Assignment: ec-number
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** 1 L-aspartate[c] '''+''' 1 ATP[c] '''+''' 1 O-ureidohomoserine[c] '''=>''' 1 AMP[c] '''+''' 1 diphosphate[c] '''+''' 1 canavaninosuccinate[c] '''+''' 1 H+[c]
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** Source: [[orthology-synechocystis]]
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* Reaction: [[ACONITATEHYDR-RXN]]
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== Genes associated with this reaction  ==
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** Source: [[annotation-experimental_annotation]]
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Genes have been associated with this reaction based on different elements listed below.
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*** Assignment: ec-number
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* [[Tiso_gene_12592]]
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* Reaction: [[RXN-14047]]
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** IN-SILICO_ANNOTATION
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** Source: [[annotation-experimental_annotation]]
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***EC-NUMBER
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*** Assignment: ec-number
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** EXPERIMENTAL_ANNOTATION
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== Pathways associated ==
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***EC-NUMBER
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* [[PWY-5750]]
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** [[pantograph]]-[[esiliculosus]]
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* [[PWY-5913]]
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== Pathways  ==
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* [[PWY-6969]]
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* [[PWY-5]], canavanine biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5 PWY-5]
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* [[PWY-6549]]
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** '''2''' reactions found over '''4''' reactions in the full pathway
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* [[PWY-5392]]
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== Reconstruction information  ==
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* [[TCA]]
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* [[orthology]]:
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* [[P23-PWY]]
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** [[pantograph]]:
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* [[P105-PWY]]
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*** [[esiliculosus]]
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* [[GLYOXYLATE-BYPASS]]
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* [[annotation]]:
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* [[FERMENTATION-PWY]]
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** [[pathwaytools]]:
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* [[PWY-6728]]
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*** [[experimental_annotation]]
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* [[REDCITCYC]]
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*** [[in-silico_annotation]]
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* [[PWY-7254]]
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* [[PWY-7124]]
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* [[PWY66-398]]
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* [[PWY-5690]]
 
== External links  ==
 
== External links  ==
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: right end position=5505}}
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{{#set: common name=argininosuccinate_synthase}}
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{{#set: transcription direction=POSITIVE}}
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{{#set: ec number=EC-6.3.4.5}}
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{{#set: left end position=1946}}
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{{#set: gene associated=Tiso_gene_12592}}
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{{#set: centisome position=29.574469    }}
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{{#set: in pathway=PWY-5}}
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{{#set: reaction associated=ACONITATEDEHYDR-RXN|ACONITATEHYDR-RXN|RXN-14047}}
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{{#set: reconstruction category=orthology}}
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{{#set: pathway associated=PWY-5750|PWY-5913|PWY-6969|PWY-6549|PWY-5392|TCA|P23-PWY|P105-PWY|GLYOXYLATE-BYPASS|FERMENTATION-PWY|PWY-6728|REDCITCYC|PWY-7254|PWY-7124|PWY66-398|PWY-5690}}
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{{#set: reconstruction tool=pantograph}}
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{{#set: reconstruction source=esiliculosus}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction source=experimental_annotation|in-silico_annotation}}
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Latest revision as of 20:35, 21 March 2018

Gene Tiso_gene_13007

  • right end position:
    • 5505
  • transcription direction:
    • POSITIVE
  • left end position:
    • 1946
  • centisome position:
    • 29.574469
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_13007&oldid=42595"